RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 VPS37AQ8NEZ2 397 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 OR6N1Q8NGY5 312 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 SLC38A4Q969I6 547 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 TRIM44Q96DX7 344 aaPredicted RBP10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 ELMOD3Q96FG2 381 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 PKNOX2Q96KN3 472 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 C16orf45Q96MC5 204 aaPredicted RBP10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 SORT1Q99523 831 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 GPA33Q99795 319 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 RBM4BQ9BQ04 359 aaKnown RBP10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 DECR2Q9NUI1 292 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 TMEM38BQ9NVV0 291 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 SLCO1C1Q9NYB5 712 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 P2RX2Q9UBL9 471 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 EGFL7Q9UHF1 273 aa10.01□□□□□ -0.81
SPTLC1P3-201ENST00000403408 FAM181BA6NEQ2 426 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 TPD52L2O43399 206 aaKnown RBP10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 AKAP8O43823 692 aaKnown RBP10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 OR2T1O43869 369 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 TPST1O60507 370 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 FOXH1O75593 365 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 SERPINI2O75830 405 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 TSPAN15O95858 294 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 PLATP00750 562 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 MMP7P09237 267 aaPredicted RBP10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 CSNK1A1P48729 337 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 ZNF81P51508 661 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 CLNS1AP54105 237 aaKnown RBP10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 BIDP55957 195 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 PUDPQ08623 228 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 PIWIL3Q7Z3Z3 882 aaKnown RBP10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 HOMEZQ8IX15 550 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 IFT20Q8IY31 132 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 C10orf111Q8N326 155 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 LSMEM1Q8N8F7 131 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 SNX33Q8WV41 574 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 IPCEF1Q8WWN9 437 aaPredicted RBP10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 C11orf40Q8WZ69 217 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 MAL2Q969L2 176 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 DACT3Q96B18 629 aaPredicted RBP10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 KCTD12Q96CX2 325 aaKnown RBP10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 MARS2Q96GW9 593 aaKnown RBP10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 TIMD4Q96H15 378 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 ZIM3Q96PE6 472 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 OR52E6Q96RD3 313 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 DCLRE1CQ96SD1 692 aaKnown RBP10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 RHOXF2Q9BQY4 288 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 MMP27Q9H306 513 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 C12orf10Q9HB07 376 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 AIG1Q9NVV5 245 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 GLTPQ9NZD2 209 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 C1RLQ9NZP8 487 aa10□□□□□ -0.81
SPTLC1P3-201ENST00000403408 SLC22A23A1A5C7 686 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 A8MXK9 166 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 HOXA3O43365 443 aaPredicted RBP9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 SNAP29O95721 258 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 KNG1P01042 644 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 SBK2P0C263 348 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 NQO1P15559 274 aaKnown RBP9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 CRISP3P54108 245 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 DSTNP60981 165 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 TXNL4AP83876 142 aaKnown RBP9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 PMS2P3Q13401 168 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 LARS2Q15031 903 aaKnown RBP9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 DPY19L1Q2PZI1 675 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 DEFB112Q30KQ8 113 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 FBLN7Q53RD9 439 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 FAM209AQ5JX71 171 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 THEM4Q5T1C6 240 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 NET1Q7Z628 596 aaPredicted RBP9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 SCAIQ8N9R8 606 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 OR4K5Q8NGD3 323 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 UBLCP1Q8WVY7 318 aaPredicted RBP9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 SIGLEC11Q96RL6 698 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 CCT8L2Q96SF2 557 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 NUF2Q9BZD4 464 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 MS4A7Q9GZW8 240 aaPredicted RBP9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 PRDM13Q9H4Q3 707 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 PATZ1Q9HBE1 687 aaKnown RBP9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 CDH20Q9HBT6 801 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 B3GAT2Q9NPZ5 323 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 MRPL39Q9NYK5 338 aaKnown RBP9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 KLHL21Q9UJP4 597 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 GPR45Q9Y5Y3 372 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 NPTNQ9Y639 398 aa9.99□□□□□ -0.81
SPTLC1P3-201ENST00000403408 PLXNB1O43157 2135 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 LOC100509620A0A075B734 347 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 A0A0G2JPF8 293 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 TLDC2A0PJX2 215 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 WDR91A4D1P6 747 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 ZNF726A6NNF4 738 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 HNRNPCL2B2RXH8 293 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 HNRNPCL3B7ZW38 293 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 C11orf98E9PRG8 122 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 DHHO43323 396 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 TYROBPO43914 113 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 HNRNPCL1O60812 293 aaKnown RBP9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 ADH4P08319 380 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 HNRNPCL4P0DMR1 293 aa9.98□□□□□ -0.81
SPTLC1P3-201ENST00000403408 THRBP10828 461 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms