RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 SCO1O75880 301 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 UTS2O95399 124 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 C4BPBP20851 252 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 SMAD2Q15796 467 aaKnown RBP23.16■■□□□ 1.3
COL13A1-203ENST00000398969 ODF4Q2M2E3 257 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 EEF1A1P5Q5VTE0 462 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 MAMSTRQ6ZN01 415 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 SIX5Q8N196 739 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 WDR89Q96FK6 387 aaPredicted RBP23.16■■□□□ 1.3
COL13A1-203ENST00000398969 TCTN2Q96GX1 697 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 ULBP3Q9BZM4 244 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 SEMA4CQ9C0C4 833 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 SYT4Q9H2B2 425 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 MTFP1Q9UDX5 166 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 TMEM131Q92545 1883 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 LOC105371267A0A1B0GV96 52 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 GPANK1O95872 356 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 RENP00797 406 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 ATXN8OSP0DMR3 200 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 TACR3P29371 465 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 MAZP56270 477 aaKnown RBP23.16■■□□□ 1.3
COL13A1-203ENST00000398969 CSRP2Q16527 193 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 PCGF3Q3KNV8 242 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 OR5M10Q6IEU7 315 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 OR52B4Q8NGK2 314 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 TAAR8Q969N4 342 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 SFXN2Q96NB2 322 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 INTS14Q96SY0 518 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 A0A0C4DFX4 3053 aa23.16■■□□□ 1.3
COL13A1-203ENST00000398969 RBBP9O75884 186 aa23.15■■□□□ 1.3
COL13A1-203ENST00000398969 VSIG10L2P0DP72 767 aa23.15■■□□□ 1.3
COL13A1-203ENST00000398969 GALNSP34059 522 aa23.15■■□□□ 1.3
COL13A1-203ENST00000398969 WDR45BQ5MNZ6 344 aa23.15■■□□□ 1.3
COL13A1-203ENST00000398969 OIT3Q8WWZ8 545 aa23.15■■□□□ 1.3
COL13A1-203ENST00000398969 CLIP3Q96DZ5 547 aa23.15■■□□□ 1.3
COL13A1-203ENST00000398969 ELF4Q99607 663 aaPredicted RBP23.15■■□□□ 1.3
COL13A1-203ENST00000398969 NXF5Q9H1B4 397 aaKnown RBP23.15■■□□□ 1.3
COL13A1-203ENST00000398969 TMEM14AQ9Y6G1 99 aa23.15■■□□□ 1.3
COL13A1-203ENST00000398969 CHURC1-FNTBB4DL54 471 aa23.15■■□□□ 1.3
COL13A1-203ENST00000398969 L7N2F9 121 aa23.15■■□□□ 1.3
COL13A1-203ENST00000398969 KIR3DL2P43630 455 aa23.15■■□□□ 1.3
COL13A1-203ENST00000398969 SERTAD2Q14140 314 aa23.15■■□□□ 1.3
COL13A1-203ENST00000398969 SMUG1Q53HV7 270 aa23.15■■□□□ 1.3
COL13A1-203ENST00000398969 NHLRC1Q6VVB1 395 aa23.15■■□□□ 1.3
COL13A1-203ENST00000398969 HDDC2Q7Z4H3 204 aa23.15■■□□□ 1.3
COL13A1-203ENST00000398969 ZNF563Q8TA94 476 aa23.15■■□□□ 1.3
COL13A1-203ENST00000398969 MCHR2Q969V1 340 aa23.15■■□□□ 1.3
COL13A1-203ENST00000398969 AMELYQ99218 206 aa23.15■■□□□ 1.3
COL13A1-203ENST00000398969 PELOQ9BRX2 385 aaKnown RBP23.15■■□□□ 1.3
COL13A1-203ENST00000398969 TMPRSS13Q9BYE2 586 aa23.15■■□□□ 1.3
COL13A1-203ENST00000398969 LMAN1LQ9HAT1 526 aa23.15■■□□□ 1.3
COL13A1-203ENST00000398969 ING1Q9UK53 422 aaPredicted RBP23.15■■□□□ 1.3
COL13A1-203ENST00000398969 TUBAL3A6NHL2 446 aa23.14■■□□□ 1.29
COL13A1-203ENST00000398969 NFYAP23511 347 aaPredicted RBP23.14■■□□□ 1.29
COL13A1-203ENST00000398969 FAUP35544 74 aaKnown RBP23.14■■□□□ 1.29
COL13A1-203ENST00000398969 SLC37A1P57057 533 aa23.14■■□□□ 1.29
COL13A1-203ENST00000398969 RASGEF1BQ0VAM2 473 aa23.14■■□□□ 1.29
COL13A1-203ENST00000398969 RBMS2Q15434 407 aaKnown RBP23.14■■□□□ 1.29
COL13A1-203ENST00000398969 NHLRC3Q5JS37 347 aa23.14■■□□□ 1.29
COL13A1-203ENST00000398969 ANKRD16Q6P6B7 361 aa23.14■■□□□ 1.29
COL13A1-203ENST00000398969 LRRC69Q6ZNQ3 347 aa23.14■■□□□ 1.29
COL13A1-203ENST00000398969 CHMP1BQ7LBR1 199 aa23.14■■□□□ 1.29
COL13A1-203ENST00000398969 OR4C16Q8NGL9 310 aa23.14■■□□□ 1.29
COL13A1-203ENST00000398969 PTPMT1Q8WUK0 201 aaPredicted RBP23.14■■□□□ 1.29
COL13A1-203ENST00000398969 C4orf45Q96LM5 186 aa23.14■■□□□ 1.29
COL13A1-203ENST00000398969 DCBLD2Q96PD2 775 aa23.14■■□□□ 1.29
COL13A1-203ENST00000398969 CA14Q9ULX7 337 aa23.14■■□□□ 1.29
COL13A1-203ENST00000398969 HIST1H2ABP04908 130 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 HOXD11P31277 338 aaPredicted RBP23.13■■□□□ 1.29
COL13A1-203ENST00000398969 GABRA4P48169 554 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 EFNB2P52799 333 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 FAM198BQ6UWH4 519 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 HIST3H2AQ7L7L0 130 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 SLC36A1Q7Z2H8 476 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 PM20D2Q8IYS1 436 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 HIST1H2ACQ93077 130 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 OMA1Q96E52 524 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 ZNF285Q96NJ3 590 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 GPR27Q9NS67 375 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 GGT3PA6NGU5 568 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 CTAG2O75638 210 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 PPICP45877 212 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 MFSD13AQ14CX5 517 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 WDR38Q5JTN6 314 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 C3P1Q6ZMU1 363 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 NUP54Q7Z3B4 507 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 OR51D1Q8NGF3 324 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 GINS4Q9BRT9 223 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 LRRC61Q9BV99 259 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 ZNF224Q9NZL3 707 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 KIF25Q9UIL4 384 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 KCNG2Q9UJ96 466 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 SPEF1Q9Y4P9 236 aa23.13■■□□□ 1.29
COL13A1-203ENST00000398969 TDRD6O60522 2096 aaKnown RBP23.12■■□□□ 1.29
COL13A1-203ENST00000398969 HSPB2A8KAH6 182 aa23.12■■□□□ 1.29
COL13A1-203ENST00000398969 MCRIP1C9JLW8 97 aa23.12■■□□□ 1.29
COL13A1-203ENST00000398969 HSPB2Q16082 182 aa23.12■■□□□ 1.29
COL13A1-203ENST00000398969 TMEM65Q6PI78 240 aa23.12■■□□□ 1.29
COL13A1-203ENST00000398969 TSTD1Q8NFU3 115 aa23.12■■□□□ 1.29
COL13A1-203ENST00000398969 ADAM19Q9H013 955 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms