RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 OR10H4Q8NGA5 316 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 OR52N5Q8NH56 324 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 RASL10BQ96S79 203 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 ZMIZ1Q9ULJ6 1067 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 BOKQ9UMX3 212 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-206ENST00000397617 CMAHPQ9Y471 501 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 FCGR2AP12318 317 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 ALAS2P22557 587 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 CTXN1P60606 82 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 VBP1P61758 197 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 SCRN3Q0VDG4 424 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 ADGRG3Q86Y34 549 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 GRPEL2Q8TAA5 225 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 OXGR1Q96P68 337 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 NUDT22Q9BRQ3 303 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 OR51E2Q9H255 320 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 CA14Q9ULX7 337 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 ZNF175Q9Y473 711 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 MED12LQ86YW9 2145 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 FAM90A10PA6NDY2 464 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 FAM90A18PA6NE21 464 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 FAM90A16PA6NEW6 464 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 FAM90A20PA6NIJ5 464 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 FAM90A8PA6NJQ4 464 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 FAM90A7PA6NKC0 464 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 FAM90A22PA8MWA6 464 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 SNRPGP15A8MWD9 76 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 FAM90A12PA8MX19 464 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 FAM90A5PA8MXJ8 464 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 FAM90A23PA8MXZ1 464 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 HEXBP07686 556 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 FAM90A15PP0C7V4 464 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 FAM90A13PP0C7W8 464 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 FAM90A14PP0C7W9 464 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 FAM90A24PP0C7X0 464 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 MAKP20794 623 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 BCKDHBP21953 392 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 PTGS2P35354 604 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 DHPSP49366 369 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-206ENST00000397617 CD226Q15762 336 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 ACTBL2Q562R1 376 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 SFXN4Q6P4A7 337 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 LYPD8Q6UX82 237 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 CCBE1Q6UXH8 406 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-206ENST00000397617 OR2W3Q7Z3T1 314 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 OR4N5Q8IXE1 308 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 ZFP3Q96NJ6 502 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 LMF1Q96S06 567 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 LRRN3E7EW58 273 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 RNF13O43567 381 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 ZNF354AO60765 605 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-206ENST00000397617 IGKV1D-16P01601 117 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 TFP02787 698 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 SOX11P35716 441 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 DOC2BQ14184 412 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 SURF2Q15527 256 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-206ENST00000397617 TMEM91Q6ZNR0 172 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 GRHL3Q8TE85 626 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 TMEM45BQ96B21 275 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 MESP1Q9BRJ9 268 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 PTDSS2Q9BVG9 487 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 LINC00470Q9BZP3 86 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 ST6GALNAC2Q9UJ37 374 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 COLQQ9Y215 455 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-206ENST00000397617 IER3IP1Q9Y5U9 82 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 AQP7P3A6NL99 342 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 CD8BP10966 210 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 FOLR1P15328 257 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 CASRP41180 1078 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 CBX5P45973 191 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 MAP2K3P46734 347 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 ACSM3Q53FZ2 586 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 VASNQ6EMK4 673 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 UNQ6126/PRO20091Q6UXV3 157 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 CDC20BQ86Y33 519 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 GHSRQ92847 366 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 C6orf62Q9GZU0 229 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-206ENST00000397617 TMEM138Q9NPI0 162 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 FLVCR1Q9Y5Y0 555 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 A0A1W2PQL4 384 aaPredicted RBP5.29□□□□□ -1.56
PTPRD-206ENST00000397617 SIGLEC6O43699 453 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 IL5P05113 134 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 ZNF806P0C7X5 589 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 IL9P15248 144 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 HIST1H1CP16403 213 aaKnown RBP5.29□□□□□ -1.56
PTPRD-206ENST00000397617 RAB6AP20340 208 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 ECI1P42126 302 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 MAP2K4P45985 399 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 EGR4Q05215 589 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 PLPPR5Q32ZL2 321 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 FAM27BQ5VT28 67 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 TMEFF1Q8IYR6 380 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 RDH10Q8IZV5 341 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 OR6V1Q8N148 313 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 FTMTQ8N4E7 242 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 UBE2FQ969M7 185 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 EGLN3Q9H6Z9 239 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 EXO5Q9H790 373 aa5.29□□□□□ -1.56
PTPRD-206ENST00000397617 MYOCOSA0A1B0GUC4 107 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms