RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 GABARAPL2P60520 117 aa18.81■□□□□ 0.6
CPNE1-204ENST00000397443 OR6N1Q8NGY5 312 aa18.81■□□□□ 0.6
CPNE1-204ENST00000397443 OR2T4Q8NH00 348 aa18.81■□□□□ 0.6
CPNE1-204ENST00000397443 ALG12Q9BV10 488 aa18.81■□□□□ 0.6
CPNE1-204ENST00000397443 TAS2R16Q9NYV7 291 aa18.81■□□□□ 0.6
CPNE1-204ENST00000397443 SCOCQ9UIL1 159 aa18.81■□□□□ 0.6
CPNE1-204ENST00000397443 MED12LQ86YW9 2145 aa18.81■□□□□ 0.6
CPNE1-204ENST00000397443 MT-ND2P03891 347 aa18.8■□□□□ 0.6
CPNE1-204ENST00000397443 NAA10P41227 235 aaPredicted RBP18.8■□□□□ 0.6
CPNE1-204ENST00000397443 SLC15A1P46059 708 aa18.8■□□□□ 0.6
CPNE1-204ENST00000397443 SLC25A1P53007 311 aa18.8■□□□□ 0.6
CPNE1-204ENST00000397443 C3P1Q6ZMU1 363 aa18.8■□□□□ 0.6
CPNE1-204ENST00000397443 AAED1Q7RTV5 226 aa18.8■□□□□ 0.6
CPNE1-204ENST00000397443 HDDC2Q7Z4H3 204 aa18.8■□□□□ 0.6
CPNE1-204ENST00000397443 CD163Q86VB7 1156 aa18.8■□□□□ 0.6
CPNE1-204ENST00000397443 ZNF511Q8NB15 262 aa18.8■□□□□ 0.6
CPNE1-204ENST00000397443 IPCEF1Q8WWN9 437 aaPredicted RBP18.8■□□□□ 0.6
CPNE1-204ENST00000397443 MYDGFQ969H8 173 aa18.8■□□□□ 0.6
CPNE1-204ENST00000397443 ADAD1Q96M93 576 aaKnown RBP18.8■□□□□ 0.6
CPNE1-204ENST00000397443 MRPL13Q9BYD1 178 aaKnown RBP18.8■□□□□ 0.6
CPNE1-204ENST00000397443 WARS2Q9UGM6 360 aaKnown RBP18.8■□□□□ 0.6
CPNE1-204ENST00000397443 B9D1Q9UPM9 204 aa18.8■□□□□ 0.6
CPNE1-204ENST00000397443 NOSIPQ9Y314 301 aaKnown RBP18.8■□□□□ 0.6
CPNE1-204ENST00000397443 TVP23AA6NH52 213 aa18.8■□□□□ 0.6
CPNE1-204ENST00000397443 M0R3G1 203 aa18.8■□□□□ 0.6
CPNE1-204ENST00000397443 HLA-DQA2P01906 255 aa18.8■□□□□ 0.6
CPNE1-204ENST00000397443 ABOP16442 354 aa18.8■□□□□ 0.6
CPNE1-204ENST00000397443 ST3GAL2Q16842 350 aa18.8■□□□□ 0.6
CPNE1-204ENST00000397443 PCSK4Q6UW60 755 aa18.8■□□□□ 0.6
CPNE1-204ENST00000397443 RPTNQ6XPR3 784 aa18.8■□□□□ 0.6
CPNE1-204ENST00000397443 OR52I1Q8NGK6 324 aa18.8■□□□□ 0.6
CPNE1-204ENST00000397443 RBP7Q96R05 134 aa18.8■□□□□ 0.6
CPNE1-204ENST00000397443 TBX5Q99593 518 aa18.8■□□□□ 0.6
CPNE1-204ENST00000397443 FKBP14Q9NWM8 211 aa18.8■□□□□ 0.6
CPNE1-204ENST00000397443 PHF3Q92576 2039 aaKnown RBP18.79■□□□□ 0.6
CPNE1-204ENST00000397443 ERVH48-1M5A8F1 160 aa18.79■□□□□ 0.6
CPNE1-204ENST00000397443 FADS2O95864 444 aaKnown RBP18.79■□□□□ 0.6
CPNE1-204ENST00000397443 IGHV3-9P01782 118 aa18.79■□□□□ 0.6
CPNE1-204ENST00000397443 CDK1P06493 297 aa18.79■□□□□ 0.6
CPNE1-204ENST00000397443 CSNK1A1P48729 337 aa18.79■□□□□ 0.6
CPNE1-204ENST00000397443 ZNF773Q6PK81 442 aa18.79■□□□□ 0.6
CPNE1-204ENST00000397443 GFRALQ6UXV0 394 aa18.79■□□□□ 0.6
CPNE1-204ENST00000397443 GCNT2Q8N0V5 402 aa18.79■□□□□ 0.6
CPNE1-204ENST00000397443 TMEM123Q8N131 208 aa18.79■□□□□ 0.6
CPNE1-204ENST00000397443 SLX1AQ9BQ83 275 aa18.79■□□□□ 0.6
CPNE1-204ENST00000397443 CNOT2Q9NZN8 540 aaKnown RBP18.79■□□□□ 0.6
CPNE1-204ENST00000397443 EMC3Q9P0I2 261 aa18.79■□□□□ 0.6
CPNE1-204ENST00000397443 CLCF1Q9UBD9 225 aa18.79■□□□□ 0.6
CPNE1-204ENST00000397443 COA3Q9Y2R0 106 aaPredicted RBP18.79■□□□□ 0.6
CPNE1-204ENST00000397443 A0A087WXM4 84 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 TRIM64A6NGJ6 449 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 AKAP8O43823 692 aaKnown RBP18.78■□□□□ 0.6
CPNE1-204ENST00000397443 SELENOFO60613 162 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 ZNF432O94892 652 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 GLCEO94923 617 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 SFTPCP11686 197 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 MAP2K4P45985 399 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 RNPS1Q15287 305 aaKnown RBP18.78■□□□□ 0.6
CPNE1-204ENST00000397443 ACSF3Q4G176 576 aaPredicted RBP18.78■□□□□ 0.6
CPNE1-204ENST00000397443 KLHL22Q53GT1 634 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 PHYHD1Q5SRE7 291 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 LINC01590Q5TEZ4 76 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 LCN1P1Q5VSP4 162 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 SNX18Q96RF0 628 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 CCNB1IP1Q9NPC3 277 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 ZNF175Q9Y473 711 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 SNX5Q9Y5X3 404 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 FKBP7Q9Y680 259 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 FREM1Q5H8C1 2179 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 COL6A6A6NMZ7 2263 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 IGKV3D-15A0A087WSY6 115 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 GPR171O14626 319 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 QDPRP09417 244 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 EDNRAP25101 427 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 CRABP1P29762 137 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 HCCSP53701 268 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 RAB40BQ12829 278 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 ADGRE4PQ86SQ3 457 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 HTRA1Q92743 480 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 MCHR2Q969V1 340 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 TMEM80Q96HE8 168 aa18.78■□□□□ 0.6
CPNE1-204ENST00000397443 IGLV1-36A0A0B4J1U3 117 aa18.77■□□□□ 0.6
CPNE1-204ENST00000397443 AHRRA9YTQ3 701 aa18.77■□□□□ 0.6
CPNE1-204ENST00000397443 MRPL33O75394 65 aaKnown RBP18.77■□□□□ 0.6
CPNE1-204ENST00000397443 CLPTM1O96005 669 aa18.77■□□□□ 0.6
CPNE1-204ENST00000397443 YES1P07947 543 aa18.77■□□□□ 0.6
CPNE1-204ENST00000397443 PIPP12273 146 aaPredicted RBP18.77■□□□□ 0.6
CPNE1-204ENST00000397443 FCGR2AP12318 317 aa18.77■□□□□ 0.6
CPNE1-204ENST00000397443 SLC35D3Q5M8T2 416 aa18.77■□□□□ 0.6
CPNE1-204ENST00000397443 THEM4Q5T1C6 240 aa18.77■□□□□ 0.6
CPNE1-204ENST00000397443 ZBTB46Q86UZ6 589 aa18.77■□□□□ 0.6
CPNE1-204ENST00000397443 ERI1Q8IV48 349 aaKnown RBP18.77■□□□□ 0.6
CPNE1-204ENST00000397443 SPARTQ8N0X7 666 aa18.77■□□□□ 0.6
CPNE1-204ENST00000397443 MRPS26Q9BYN8 205 aaKnown RBP18.77■□□□□ 0.6
CPNE1-204ENST00000397443 C12orf49Q9H741 205 aa18.77■□□□□ 0.6
CPNE1-204ENST00000397443 ADGRL4Q9HBW9 690 aa18.77■□□□□ 0.6
CPNE1-204ENST00000397443 GLTPQ9NZD2 209 aa18.77■□□□□ 0.6
CPNE1-204ENST00000397443 EPG5Q9HCE0 2579 aa18.77■□□□□ 0.6
CPNE1-204ENST00000397443 SLC43A1O75387 559 aa18.76■□□□□ 0.59
CPNE1-204ENST00000397443 MPZL1O95297 269 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms