RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 CRMP1Q14194 572 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 ZNF239Q16600 458 aaKnown RBP11.78□□□□□ -0.52
SEC13-209ENST00000397117 NXNL2Q5VZ03 156 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 LEG1Q6P5S2 330 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 SLC35D2Q76EJ3 337 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 GID4Q8IVV7 300 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 DMRTC2Q8IXT2 367 aaPredicted RBP11.78□□□□□ -0.52
SEC13-209ENST00000397117 ARIH2OSQ8N7S6 290 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 CYB561A3Q8NBI2 242 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 SLC37A3Q8NCC5 494 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 TSPAN14Q8NG11 270 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 ASB5Q8WWX0 329 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 CPNE4Q96A23 557 aaPredicted RBP11.78□□□□□ -0.52
SEC13-209ENST00000397117 NMNAT3Q96T66 252 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 AMBNQ9NP70 447 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 FANCFQ9NPI8 374 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 HINT3Q9NQE9 182 aaKnown RBP11.78□□□□□ -0.52
SEC13-209ENST00000397117 PLCXD1Q9NUJ7 323 aa11.78□□□□□ -0.52
SEC13-209ENST00000397117 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.78□□□□□ -0.52
SEC13-209ENST00000397117 RPL36Q9Y3U8 105 aaKnown RBP11.78□□□□□ -0.52
SEC13-209ENST00000397117 A0A1B0GTH9 108 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 A6NIZ1 184 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 NPIPB13A6NJU9 1138 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 ZNF814B7Z6K7 855 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 NPIPB4C9JG80 1138 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 NPIPA2E9PIF3 369 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 NPIPA3F8WFD2 350 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 ARHGEF9O43307 516 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 SYNGR4O95473 234 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 RENP00797 406 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 HLA-DOBP13765 273 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 CDH11P55287 796 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 GABARAPL2P60520 117 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 RAP1BP61224 184 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 RAP1AP62834 184 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 ZNF362Q5T0B9 420 aaPredicted RBP11.77□□□□□ -0.53
SEC13-209ENST00000397117 FAM205BPQ63HN1 556 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 TMEM211Q6ICI0 200 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 HDDC2Q7Z4H3 204 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 ADCK1Q86TW2 530 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 IPCEF1Q8WWN9 437 aaPredicted RBP11.77□□□□□ -0.53
SEC13-209ENST00000397117 UCN2Q96RP3 112 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 TIMP4Q99727 224 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 KLHL13Q9P2N7 655 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 B3GAT1Q9P2W7 334 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 SPRR3Q9UBC9 169 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 CAMK2AQ9UQM7 478 aa11.77□□□□□ -0.53
SEC13-209ENST00000397117 LOC102725191A0A1B0GVB3 256 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 FAM221AA4D161 298 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 NKX2-6A6NCS4 301 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 EFCAB10A6NFE3 127 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 TRIM64CA6NLI5 447 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 CLCA1A8K7I4 914 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 CD99P14209 185 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 CPN1P15169 458 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 KLK2P20151 261 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 CHRNB4P30926 498 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 CDKN2AP42771 156 aaKnown RBP11.76□□□□□ -0.53
SEC13-209ENST00000397117 SLC16A1P53985 500 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 RPS7P62081 194 aaKnown RBP11.76□□□□□ -0.53
SEC13-209ENST00000397117 LGALS3BPQ08380 585 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 MELKQ14680 651 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 KLHL12Q53G59 568 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 MESTQ5EB52 335 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 AADACL4Q5VUY2 407 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 CD163Q86VB7 1156 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 NPEPL1Q8NDH3 523 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 BBS1Q8NFJ9 593 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 ZNF519Q8TB69 540 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 ASB10Q8WXI3 467 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 MYDGFQ969H8 173 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 ZNF845Q96IR2 970 aaPredicted RBP11.76□□□□□ -0.53
SEC13-209ENST00000397117 COPS4Q9BT78 406 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 MRPS26Q9BYN8 205 aaKnown RBP11.76□□□□□ -0.53
SEC13-209ENST00000397117 OR51V1Q9H2C8 321 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 MED20Q9H944 212 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 CCNB1IP1Q9NPC3 277 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 PSORS1C1Q9UIG5 152 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 MCTS1Q9ULC4 181 aaKnown RBP11.76□□□□□ -0.53
SEC13-209ENST00000397117 ABCA2Q9BZC7 2435 aa11.76□□□□□ -0.53
SEC13-209ENST00000397117 ZNF469Q96JG9 3925 aaPredicted RBP11.76□□□□□ -0.53
SEC13-209ENST00000397117 A0A087WXM4 84 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 A0A1B0GVC2 190 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 AQP7O14520 342 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 SMAD9O15198 467 aaKnown RBP11.75□□□□□ -0.53
SEC13-209ENST00000397117 RAMP1O60894 148 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 TPOP07202 933 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 HOXD4P09016 255 aaPredicted RBP11.75□□□□□ -0.53
SEC13-209ENST00000397117 HTR1FP30939 366 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 CDH15P55291 814 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 ZNF91Q05481 1191 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 ARMC4Q5T2S8 1044 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 EEF1A1P5Q5VTE0 462 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 NIPAL3Q6P499 406 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 AHSA2Q719I0 299 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 MEPCEQ7L2J0 689 aaKnown RBP11.75□□□□□ -0.53
SEC13-209ENST00000397117 FCRLAQ7L513 359 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 OR9K2Q8NGE7 335 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 ROBO4Q8WZ75 1007 aa11.75□□□□□ -0.53
SEC13-209ENST00000397117 GGHQ92820 318 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms