RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 ZNF83P51522 516 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 TAS2R41P59536 307 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 TOP3AQ13472 1001 aaPredicted RBP12.76□□□□□ -0.37
SEC13-208ENST00000397109 FAHD1Q6P587 224 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 PRSS57Q6UWY2 283 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 WDR88Q6ZMY6 472 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 THAP5Q7Z6K1 395 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 PXKQ7Z7A4 578 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 TMEM179BQ7Z7N9 219 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 CYP4Z1Q86W10 505 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 C8orf59Q8N0T1 100 aaPredicted RBP12.76□□□□□ -0.37
SEC13-208ENST00000397109 DEPDC4Q8N2C3 294 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 GPR137CQ8N3F9 429 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 LINC00471Q8N535 108 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 LILRB1Q8NHL6 650 aaPredicted RBP12.76□□□□□ -0.37
SEC13-208ENST00000397109 IGFBPL1Q8WX77 278 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 DHRS1Q96LJ7 313 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 ALKBH3Q96Q83 286 aaPredicted RBP12.76□□□□□ -0.37
SEC13-208ENST00000397109 ZNF426Q9BUY5 554 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 GSX2Q9BZM3 304 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 TOR3AQ9H497 397 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 FKRPQ9H9S5 495 aa12.76□□□□□ -0.37
SEC13-208ENST00000397109 PDP1Q9P0J1 537 aaPredicted RBP12.76□□□□□ -0.37
SEC13-208ENST00000397109 TMEFF2Q9UIK5 374 aaPredicted RBP12.76□□□□□ -0.37
SEC13-208ENST00000397109 A0A087WXM4 84 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 A0A1W2PR80 420 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 TRIM64CA6NLI5 447 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 ABCD4O14678 606 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 UPK3AO75631 287 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 HIST1H2ABP04908 130 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 PTNP21246 168 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 IGFBP5P24593 272 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 CD40P25942 277 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 RRM2P31350 389 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 RBM34P42696 430 aaKnown RBP12.75□□□□□ -0.37
SEC13-208ENST00000397109 ROR2Q01974 943 aaKnown RBP12.75□□□□□ -0.37
SEC13-208ENST00000397109 PIN1Q13526 163 aaPredicted RBP12.75□□□□□ -0.37
SEC13-208ENST00000397109 APOFQ13790 326 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 ZNF74Q16587 644 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 RBM48Q5RL73 367 aaKnown RBP12.75□□□□□ -0.37
SEC13-208ENST00000397109 HIST3H2AQ7L7L0 130 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 KBTBD8Q8NFY9 601 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 TSPAN14Q8NG11 270 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 OR1K1Q8NGR3 316 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 GIPC3Q8TF64 312 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 SMAP2Q8WU79 429 aaPredicted RBP12.75□□□□□ -0.37
SEC13-208ENST00000397109 HIST1H2ACQ93077 130 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 LRR1Q96L50 414 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 HS6ST2Q96MM7 605 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 OR2M2Q96R28 347 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 ANKRD19PQ9H560 264 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 SMURF2Q9HAU4 748 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 MOV10Q9HCE1 1003 aaKnown RBP12.75□□□□□ -0.37
SEC13-208ENST00000397109 NANSQ9NR45 359 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 MAN2C1Q9NTJ4 1040 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 LYVE1Q9Y5Y7 322 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 ACANP16112 2415 aa12.75□□□□□ -0.37
SEC13-208ENST00000397109 A0A1W2PRQ8 180 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 ZNF726A6NNF4 738 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 SHISA9B4DS77 424 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 LRRN3E7EW58 273 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 M0R1B8 84 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 CH25HO95992 272 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 IGF2P01344 180 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 ADORA3P0DMS8 318 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 PAX1P15863 534 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 AHCYP23526 432 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 CDH11P55287 796 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 UBE2NP61088 152 aaKnown RBP12.74□□□□□ -0.37
SEC13-208ENST00000397109 RPS4XP62701 263 aaKnown RBP12.74□□□□□ -0.37
SEC13-208ENST00000397109 POU3F1Q03052 451 aaPredicted RBP12.74□□□□□ -0.37
SEC13-208ENST00000397109 LGALS3BPQ08380 585 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 ST3GAL3Q11203 375 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 ZP4Q12836 540 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 FOXD4Q12950 439 aaPredicted RBP12.74□□□□□ -0.37
SEC13-208ENST00000397109 DGCR6Q14129 220 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 MICAQ29983 383 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 TBRG1Q3YBR2 411 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 ANKRD16Q6P6B7 361 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 TMEM123Q8N131 208 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 PIAS4Q8N2W9 510 aaPredicted RBP12.74□□□□□ -0.37
SEC13-208ENST00000397109 BCL2L2Q92843 193 aaPredicted RBP12.74□□□□□ -0.37
SEC13-208ENST00000397109 PRSS27Q9BQR3 290 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 NMNAT1Q9HAN9 279 aaPredicted RBP12.74□□□□□ -0.37
SEC13-208ENST00000397109 B3GAT2Q9NPZ5 323 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 ZNF701Q9NV72 531 aaPredicted RBP12.74□□□□□ -0.37
SEC13-208ENST00000397109 FAIMQ9NVQ4 179 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 VNN3Q9NY84 501 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 CISD1Q9NZ45 108 aaKnown RBP12.74□□□□□ -0.37
SEC13-208ENST00000397109 ZNF229Q9UJW7 825 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 BLOC1S6Q9UL45 172 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 LAMP3Q9UQV4 416 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 U3KQV3 271 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 MTORP42345 2549 aa12.74□□□□□ -0.37
SEC13-208ENST00000397109 SLC35F4A4IF30 521 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 J3KTA2 159 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 GNAO1P09471 354 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 DANCRP0C864 163 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 SMIM18P0DKX4 95 aa12.73□□□□□ -0.37
SEC13-208ENST00000397109 HLA-DOBP13765 273 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms