RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 IGHV1-46P01743 117 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 IGHMP01871 453 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 BGLAPP02818 100 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 ZNF12P17014 697 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 IL12AP29459 219 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 NME5P56597 212 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 GLO1Q04760 184 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 PMS2P3Q13401 168 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 ALG10BQ5I7T1 473 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 OGFOD2Q6N063 350 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 TMEM53Q6P2H8 277 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 PXKQ7Z7A4 578 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 DPPA2Q7Z7J5 298 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 ICA1LQ8NDH6 482 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 CPEB3Q8NE35 698 aaKnown RBP12.66□□□□□ -0.38
SEC13-206ENST00000397102 OR1J2Q8NGS2 313 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 EPYCQ99645 322 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 MRI1Q9BV20 369 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 MS4A7Q9GZW8 240 aaPredicted RBP12.66□□□□□ -0.38
SEC13-206ENST00000397102 MMP27Q9H306 513 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 SLC6A13Q9NSD5 602 aa12.66□□□□□ -0.38
SEC13-206ENST00000397102 THUMPD1Q9NXG2 353 aaKnown RBP12.66□□□□□ -0.38
SEC13-206ENST00000397102 MRPL39Q9NYK5 338 aaKnown RBP12.66□□□□□ -0.38
SEC13-206ENST00000397102 TESQ9UGI8 421 aaKnown RBP12.66□□□□□ -0.38
SEC13-206ENST00000397102 WNK1Q9H4A3 2382 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 A0A1B0GUS0 222 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 TRAPPC2LH3BP13 241 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 TM9SF1O15321 606 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 FARS2O95363 451 aaKnown RBP12.65□□□□□ -0.38
SEC13-206ENST00000397102 ALDOCP09972 364 aaKnown RBP12.65□□□□□ -0.38
SEC13-206ENST00000397102 HTR2AP28223 471 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 MTNR1AP48039 350 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 FAM91A1Q658Y4 838 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 HIST2H2BDQ6DRA6 164 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 C16orf87Q6PH81 154 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 WDR88Q6ZMY6 472 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 SPATC1Q76KD6 591 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 NUDCD3Q8IVD9 361 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 WFDC12Q8WWY7 111 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 TMEM54Q969K7 222 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 PKP2Q99959 881 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 SH3GL3Q99963 347 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 LRMDAQ9H2I8 198 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 RNF121Q9H920 327 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 BCL2L10Q9HD36 194 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 TMEM38BQ9NVV0 291 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 AIG1Q9NVV5 245 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 GLTPQ9NZD2 209 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 PDP1Q9P0J1 537 aaPredicted RBP12.65□□□□□ -0.38
SEC13-206ENST00000397102 RAP2CQ9Y3L5 183 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 INSIG2Q9Y5U4 225 aa12.65□□□□□ -0.38
SEC13-206ENST00000397102 PLPP3O14495 311 aa12.64□□□□□ -0.39
SEC13-206ENST00000397102 SPRY3O43610 288 aa12.64□□□□□ -0.39
SEC13-206ENST00000397102 SERPINI2O75830 405 aa12.64□□□□□ -0.39
SEC13-206ENST00000397102 KNG1P01042 644 aa12.64□□□□□ -0.39
SEC13-206ENST00000397102 IGHV2-70P01814 119 aa12.64□□□□□ -0.39
SEC13-206ENST00000397102 OMGP23515 440 aa12.64□□□□□ -0.39
SEC13-206ENST00000397102 AHCYP23526 432 aa12.64□□□□□ -0.39
SEC13-206ENST00000397102 ETV4P43268 484 aa12.64□□□□□ -0.39
SEC13-206ENST00000397102 RPL14P50914 215 aaKnown RBP12.64□□□□□ -0.39
SEC13-206ENST00000397102 MMP15P51511 669 aa12.64□□□□□ -0.39
SEC13-206ENST00000397102 BIDP55957 195 aa12.64□□□□□ -0.39
SEC13-206ENST00000397102 ABCE1P61221 599 aaKnown RBP12.64□□□□□ -0.39
SEC13-206ENST00000397102 SLC36A2Q495M3 483 aa12.64□□□□□ -0.39
SEC13-206ENST00000397102 ULK3Q6PHR2 472 aa12.64□□□□□ -0.39
SEC13-206ENST00000397102 C17orf107Q6ZR85 190 aa12.64□□□□□ -0.39
SEC13-206ENST00000397102 C9orf139Q6ZV77 190 aa12.64□□□□□ -0.39
SEC13-206ENST00000397102 EIF1ADQ8N9N8 165 aaKnown RBP12.64□□□□□ -0.39
SEC13-206ENST00000397102 OR1J1Q8NGS3 322 aa12.64□□□□□ -0.39
SEC13-206ENST00000397102 SLC47A1Q96FL8 570 aa12.64□□□□□ -0.39
SEC13-206ENST00000397102 MOGAT1Q96PD6 335 aa12.64□□□□□ -0.39
SEC13-206ENST00000397102 ZBTB18Q99592 522 aa12.64□□□□□ -0.39
SEC13-206ENST00000397102 NUF2Q9BZD4 464 aa12.64□□□□□ -0.39
SEC13-206ENST00000397102 EGLN1Q9GZT9 426 aa12.64□□□□□ -0.39
SEC13-206ENST00000397102 TPT1P8Q9HAU6 139 aa12.64□□□□□ -0.39
SEC13-206ENST00000397102 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.64□□□□□ -0.39
SEC13-206ENST00000397102 NPTNQ9Y639 398 aa12.64□□□□□ -0.39
SEC13-206ENST00000397102 IQCMA0A1B0GVH7 501 aa12.63□□□□□ -0.39
SEC13-206ENST00000397102 A8MXK9 166 aa12.63□□□□□ -0.39
SEC13-206ENST00000397102 M0QZ24 198 aa12.63□□□□□ -0.39
SEC13-206ENST00000397102 SERPINE1P05121 402 aa12.63□□□□□ -0.39
SEC13-206ENST00000397102 ADH4P08319 380 aa12.63□□□□□ -0.39
SEC13-206ENST00000397102 ZCCHC18P0CG32 403 aa12.63□□□□□ -0.39
SEC13-206ENST00000397102 PCGF2P35227 344 aa12.63□□□□□ -0.39
SEC13-206ENST00000397102 PLP2Q04941 152 aa12.63□□□□□ -0.39
SEC13-206ENST00000397102 SRSF4Q08170 494 aaKnown RBP12.63□□□□□ -0.39
SEC13-206ENST00000397102 ZNF362Q5T0B9 420 aaPredicted RBP12.63□□□□□ -0.39
SEC13-206ENST00000397102 SLC16A14Q7RTX9 510 aa12.63□□□□□ -0.39
SEC13-206ENST00000397102 KIRREL3Q8IZU9 778 aa12.63□□□□□ -0.39
SEC13-206ENST00000397102 SPICQ8N5J4 248 aa12.63□□□□□ -0.39
SEC13-206ENST00000397102 OR6X1Q8NH79 312 aa12.63□□□□□ -0.39
SEC13-206ENST00000397102 BBS10Q8TAM1 723 aa12.63□□□□□ -0.39
SEC13-206ENST00000397102 PKNOX2Q96KN3 472 aa12.63□□□□□ -0.39
SEC13-206ENST00000397102 CCT8L2Q96SF2 557 aa12.63□□□□□ -0.39
SEC13-206ENST00000397102 CITED1Q99966 193 aa12.63□□□□□ -0.39
SEC13-206ENST00000397102 C20orf27Q9GZN8 174 aa12.63□□□□□ -0.39
SEC13-206ENST00000397102 MEAF6Q9HAF1 191 aa12.63□□□□□ -0.39
SEC13-206ENST00000397102 PATZ1Q9HBE1 687 aaKnown RBP12.63□□□□□ -0.39
SEC13-206ENST00000397102 NPHS2Q9NP85 383 aa12.63□□□□□ -0.39
SEC13-206ENST00000397102 LGALS13Q9UHV8 139 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms