RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 PROCRQ9UNN8 238 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 LOXL2Q9Y4K0 774 aa14.36□□□□□ -0.11
GNE-202ENST00000396594 CEBPZOSA8MTT3 80 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 ZNF93P35789 620 aaPredicted RBP14.35□□□□□ -0.11
GNE-202ENST00000396594 SLC19A1P41440 591 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 SCAND1P57086 179 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 HSF1Q00613 529 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 SLC10A1Q14973 349 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 GPR157Q5UAW9 335 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 IGFN1Q86VF2 1251 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 PLEKHF2Q9H8W4 249 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 KCNJ16Q9NPI9 418 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 OR6C6A6NF89 314 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 H3BSH0 61 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 BSGP35613 385 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 FAM185AQ8N0U4 392 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 ARIH2OSQ8N7S6 290 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 THOC3Q96J01 351 aaKnown RBP14.35□□□□□ -0.11
GNE-202ENST00000396594 IDSB3KWA1 339 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 YY2O15391 372 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 ZNF728P0DKX0 622 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 DIO1P49895 249 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 C6orf183Q5T699 404 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 FCRLBQ6BAA4 426 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 PLXDC2Q6UX71 529 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 CYHR1Q6ZMK1 362 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 ZNF620Q6ZNG0 422 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 DPCDQ9BVM2 203 aaPredicted RBP14.35□□□□□ -0.11
GNE-202ENST00000396594 ERVMER34-1Q9H9K5 563 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 ACER3Q9NUN7 267 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 TXNL4BQ9NX01 149 aaKnown RBP14.35□□□□□ -0.11
GNE-202ENST00000396594 MYH14Q7Z406 1995 aaKnown RBP14.35□□□□□ -0.11
GNE-202ENST00000396594 C5orf67F2Z3F1 127 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 SNAPINO95295 136 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 KITLGP21583 273 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 EVI2BP34910 448 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 PXNP49023 591 aaPredicted RBP14.35□□□□□ -0.11
GNE-202ENST00000396594 VEGFCP49767 419 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 SEC61A1P61619 476 aaKnown RBP14.35□□□□□ -0.11
GNE-202ENST00000396594 NHSL2Q5HYW2 709 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 ZNF573Q86YE8 665 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 GHSRQ92847 366 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 TMEM43Q9BTV4 400 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 BEX2Q9BXY8 128 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 PPIL3Q9H2H8 161 aaKnown RBP14.35□□□□□ -0.11
GNE-202ENST00000396594 BEX1Q9HBH7 125 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 TMEM72A0PK05 275 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 DOK2O60496 412 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 IL2RAP01589 272 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 EIF4EP06730 217 aaKnown RBP14.35□□□□□ -0.11
GNE-202ENST00000396594 ADH4P08319 380 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 FNTBP49356 437 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 CLDN6P56747 220 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 TPBGQ13641 420 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 PARP16Q8N5Y8 322 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 OR4F15Q8NGB8 312 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 NRG4Q8WWG1 115 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 HINT2Q9BX68 163 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 SLC25A18Q9H1K4 315 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 TXNIPQ9H3M7 391 aa14.35□□□□□ -0.11
GNE-202ENST00000396594 PRRT4C9JH25 899 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 HMGN4O00479 90 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 HPGDSO60760 199 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 APOA2P02652 100 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 CEACAM5P06731 702 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 C21orf58P58505 322 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 SPOCK1Q08629 439 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 IKZF1Q13422 519 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 CRMP1Q14194 572 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 OR7G2Q8NG99 324 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 ITFG2Q969R8 447 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 MED18Q9BUE0 208 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 CA5BQ9Y2D0 317 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 ACOD1A6NK06 481 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 TAAR5O14804 337 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 ZNF354AO60765 605 aaPredicted RBP14.34□□□□□ -0.11
GNE-202ENST00000396594 ATP1B1P05026 303 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 ELK1P19419 428 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 RAD52P43351 418 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 CCR9P51686 369 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 TNK1Q13470 666 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 PAN3Q58A45 887 aaKnown RBP14.34□□□□□ -0.11
GNE-202ENST00000396594 CFAP77Q6ZQR2 320 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 FUNDC1Q8IVP5 155 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 FBXO27Q8NI29 283 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 LIPHQ8WWY8 451 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 WSB2Q9NYS7 404 aaPredicted RBP14.34□□□□□ -0.11
GNE-202ENST00000396594 F13BP05160 661 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 OR8G3PP0DMU2 310 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 DSCR4P56555 118 aaPredicted RBP14.34□□□□□ -0.11
GNE-202ENST00000396594 DOC2BQ14184 412 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 LPAL2Q16609 132 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 DUSP5Q16690 384 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 STT3BQ8TCJ2 826 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 CPNE4Q96A23 557 aaPredicted RBP14.34□□□□□ -0.11
GNE-202ENST00000396594 TMEM106AQ96A25 262 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 TXN2Q99757 166 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 PPP1R14DQ9NXH3 145 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 B3GALT1Q9Y5Z6 326 aa14.34□□□□□ -0.11
GNE-202ENST00000396594 SNU13P55769 128 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms