RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 AQP8O94778 261 aa8.96□□□□□ -0.98
TRIM39-203ENST00000396547 UBBP0CG47 229 aa8.96□□□□□ -0.98
TRIM39-203ENST00000396547 UBCP0CG48 685 aaKnown RBP8.96□□□□□ -0.98
TRIM39-203ENST00000396547 RD3LP0DJH9 198 aa8.96□□□□□ -0.98
TRIM39-203ENST00000396547 CD34P28906 385 aa8.96□□□□□ -0.98
TRIM39-203ENST00000396547 AVPR2P30518 371 aa8.96□□□□□ -0.98
TRIM39-203ENST00000396547 CALCRP30988 508 aa8.96□□□□□ -0.98
TRIM39-203ENST00000396547 HOXA1P49639 335 aaPredicted RBP8.96□□□□□ -0.98
TRIM39-203ENST00000396547 RPS27AP62979 156 aaKnown RBP8.96□□□□□ -0.98
TRIM39-203ENST00000396547 UBA52P62987 128 aaKnown RBP8.96□□□□□ -0.98
TRIM39-203ENST00000396547 ZIC1Q15915 447 aa8.96□□□□□ -0.98
TRIM39-203ENST00000396547 Q499Y3 187 aa8.96□□□□□ -0.98
TRIM39-203ENST00000396547 ERN2Q76MJ5 926 aaKnown RBP8.96□□□□□ -0.98
TRIM39-203ENST00000396547 RAB11FIP2Q7L804 512 aa8.96□□□□□ -0.98
TRIM39-203ENST00000396547 SLC35F3Q8IY50 421 aa8.96□□□□□ -0.98
TRIM39-203ENST00000396547 SPAG16Q8N0X2 631 aa8.96□□□□□ -0.98
TRIM39-203ENST00000396547 SYS1Q8N2H4 156 aa8.96□□□□□ -0.98
TRIM39-203ENST00000396547 OR4S1Q8NGB4 309 aa8.96□□□□□ -0.98
TRIM39-203ENST00000396547 MYADMQ96S97 322 aa8.96□□□□□ -0.98
TRIM39-203ENST00000396547 STARD5Q9NSY2 213 aa8.96□□□□□ -0.98
TRIM39-203ENST00000396547 STEAP1Q9UHE8 339 aa8.96□□□□□ -0.98
TRIM39-203ENST00000396547 DPP7Q9UHL4 492 aa8.96□□□□□ -0.98
TRIM39-203ENST00000396547 FAM96BQ9Y3D0 163 aa8.96□□□□□ -0.98
TRIM39-203ENST00000396547 C5orf51A6NDU8 294 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 GGT3PA6NGU5 568 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 LINC00587B1AMM8 73 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 LYPD3O95274 346 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 HLA-AP01891 365 aaKnown RBP8.95□□□□□ -0.98
TRIM39-203ENST00000396547 GP1BAP07359 652 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 DCNP07585 359 aaKnown RBP8.95□□□□□ -0.98
TRIM39-203ENST00000396547 RHOP08100 348 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 CMPK1P30085 196 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 TLX1P31314 330 aaPredicted RBP8.95□□□□□ -0.98
TRIM39-203ENST00000396547 P2RY2P41231 377 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 MEOX2P50222 304 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 SMAD4Q13485 552 aaKnown RBP8.95□□□□□ -0.98
TRIM39-203ENST00000396547 IL10RAQ13651 578 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 SNTB1Q13884 538 aaKnown RBP8.95□□□□□ -0.98
TRIM39-203ENST00000396547 PLPP4Q5VZY2 271 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 UNQ9370/PRO34162Q6UXP9 181 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 DPY19L4Q7Z388 723 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 GTPBP8Q8N3Z3 284 aaPredicted RBP8.95□□□□□ -0.98
TRIM39-203ENST00000396547 GALNT16Q8N428 558 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 OR5T2Q8NGG2 359 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 OR10R2Q8NGX6 335 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 PPP1R1CQ8WVI7 109 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 LCN9Q8WX39 176 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 LRRC3BQ96PB8 259 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 ELF4Q99607 663 aaPredicted RBP8.95□□□□□ -0.98
TRIM39-203ENST00000396547 TLNRD1Q9H1K6 362 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 S1PR5Q9H228 398 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 COL6A3P12111 3177 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 A0A0B4J2A0 478 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 TMEM218A2RU14 115 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 DCDC2BA2VCK2 349 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 XRCC3O43542 346 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 GPRIN2O60269 458 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 CRYBA1P05813 215 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 CSF1P09603 554 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 CT62P0C5K7 136 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 RPA2P15927 270 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 LTBRP36941 435 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 NPBWR1P48145 328 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 SNRPEP62304 92 aaKnown RBP8.95□□□□□ -0.98
TRIM39-203ENST00000396547 PPIAP62937 165 aaKnown RBP8.95□□□□□ -0.98
TRIM39-203ENST00000396547 PDZK1IP1Q13113 114 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 C2orf76Q3KRA6 126 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 PLEKHN1Q494U1 663 aaPredicted RBP8.95□□□□□ -0.98
TRIM39-203ENST00000396547 GLT8D1Q68CQ7 371 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 C3orf33Q6P1S2 294 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 KIRREL2Q6UWL6 708 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 SLC35D2Q76EJ3 337 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 GRASPQ7Z6J2 395 aaPredicted RBP8.95□□□□□ -0.98
TRIM39-203ENST00000396547 JAZF1Q86VZ6 243 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 CCDC36Q8IYA8 594 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 SVBPQ8N300 66 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 POMGNT2Q8NAT1 580 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 OR14A16Q8NHC5 309 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 SLC2A12Q8TD20 617 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 HRH4Q9H3N8 390 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 BIN3Q9NQY0 253 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 HAO2Q9NYQ3 351 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 CTSFQ9UBX1 484 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 SHPKQ9UHJ6 478 aa8.95□□□□□ -0.98
TRIM39-203ENST00000396547 NOSIPQ9Y314 301 aaKnown RBP8.95□□□□□ -0.98
TRIM39-203ENST00000396547 ERGP11308 486 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 ADH5P11766 374 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 AKR1C4P17516 323 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 CDKN2AP42771 156 aaKnown RBP8.94□□□□□ -0.98
TRIM39-203ENST00000396547 ILF3Q12906 894 aaKnown RBP eCLIP8.94□□□□□ -0.98
TRIM39-203ENST00000396547 ALKBH1Q13686 389 aaKnown RBP8.94□□□□□ -0.98
TRIM39-203ENST00000396547 HFEQ30201 348 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 NKAIN2Q5VXU1 208 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 LILRA6Q6PI73 481 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 GABRG1Q8N1C3 465 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 INO80EQ8NBZ0 244 aaPredicted RBP8.94□□□□□ -0.98
TRIM39-203ENST00000396547 NPEPL1Q8NDH3 523 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 OR6N1Q8NGY5 312 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 TMED6Q8WW62 240 aa8.94□□□□□ -0.98
TRIM39-203ENST00000396547 HLA-CQ95604 372 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms