RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 A0A1W2PQL4 384 aaPredicted RBP4.18□□□□□ -1.74
GABPB1-204ENST00000396464 LINC01553A4QN01 128 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 PSMB11A5LHX3 300 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 OR5B21A6NL26 309 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 ZNF724A8MTY0 619 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 E5RI56 91 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 NEDD8-MDP1E9PL57 170 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 ATP6V0E1O15342 81 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 RGS14O43566 566 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 UTS2O95399 124 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 TDP2O95551 362 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 IFNA5P01569 189 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 HOXB7P09629 217 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 OR4E1P0C645 316 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 DUX4L2P0CJ85 424 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 DUX4L3P0CJ86 424 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 DUX4L4P0CJ87 422 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 DUX4L5P0CJ88 424 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 DUX4L6P0CJ89 424 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 DUX4L7P0CJ90 424 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 RNH1P13489 461 aaKnown RBP4.18□□□□□ -1.74
GABPB1-204ENST00000396464 COX5AP20674 150 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 CFL1P23528 166 aaKnown RBP4.18□□□□□ -1.74
GABPB1-204ENST00000396464 MPGP29372 298 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 RFC3P40938 356 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 HCAR3P49019 387 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 GLUD2P49448 558 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 NKX2-5P52952 324 aaPredicted RBP4.18□□□□□ -1.74
GABPB1-204ENST00000396464 SLC35B1P78383 322 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 ARL16Q0P5N6 197 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 GNMTQ14749 295 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 ALX1Q15699 326 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 HLFQ16534 295 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 RBM48Q5RL73 367 aaKnown RBP4.18□□□□□ -1.74
GABPB1-204ENST00000396464 SDHAF4Q5VUM1 108 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 DUPD1Q68J44 220 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 PVRIGQ6DKI7 326 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 C11orf87Q6NUJ2 197 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 FAM199XQ6PEV8 388 aaPredicted RBP4.18□□□□□ -1.74
GABPB1-204ENST00000396464 DUX4L9Q6RFH8 374 aaPredicted RBP4.18□□□□□ -1.74
GABPB1-204ENST00000396464 METTL7BQ6UX53 244 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 KIRREL3Q8IZU9 778 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 ABHD12Q8N2K0 398 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 MREGQ8N565 214 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 LRRC52Q8N7C0 313 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 CCNYL1Q8N7R7 359 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 VN1R2Q8NFZ6 395 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 OR4K2Q8NGD2 314 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 ACTL9Q8TC94 416 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 GTF3AQ92664 365 aaKnown RBP4.18□□□□□ -1.74
GABPB1-204ENST00000396464 PSMG2Q969U7 264 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 DGCR14Q96DF8 476 aaKnown RBP4.18□□□□□ -1.74
GABPB1-204ENST00000396464 KLHDC3Q9BQ90 382 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 COPS4Q9BT78 406 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 TMEM59Q9BXS4 323 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 ESM1Q9NQ30 184 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 SAMSN1Q9NSI8 373 aaKnown RBP4.18□□□□□ -1.74
GABPB1-204ENST00000396464 MCUBQ9NWR8 336 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 PAK1IP1Q9NWT1 392 aaPredicted RBP4.18□□□□□ -1.74
GABPB1-204ENST00000396464 WRAP73Q9P2S5 460 aaPredicted RBP4.18□□□□□ -1.74
GABPB1-204ENST00000396464 DUX4Q9UBX2 424 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 FBXL3Q9UKT7 428 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 COPS3Q9UNS2 423 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 WIF1Q9Y5W5 379 aa4.18□□□□□ -1.74
GABPB1-204ENST00000396464 IGLV9-49A0A0B4J1Y8 123 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 TSPAN11A1L157 253 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 ZNF587BE7ETH6 402 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 PLPP3O14495 311 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 INPP4BO15327 924 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 ATP8B1O43520 1251 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 RAMP1O60894 148 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 CTSVO60911 334 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 NDUFB8O95169 186 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 HBE1P02100 147 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 ACSM4P0C7M7 580 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 HSPD1P10809 573 aaKnown RBP4.17□□□□□ -1.74
GABPB1-204ENST00000396464 RPL35AP18077 110 aaKnown RBP4.17□□□□□ -1.74
GABPB1-204ENST00000396464 ZP3P21754 424 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 EDNRAP25101 427 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 ARR3P36575 388 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 DLX5P56178 289 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 FBXW4P57775 412 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 ERVS71-1P61550 626 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 ARF6P62330 175 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 SSBP2P81877 361 aaPredicted RBP4.17□□□□□ -1.74
GABPB1-204ENST00000396464 TFF2Q03403 129 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 NAB1Q13506 487 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 OXA1LQ15070 435 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 CALCRLQ16602 461 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 PGGHGQ32M88 737 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 FAM120AOSQ5T036 256 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 WDR25Q64LD2 544 aaPredicted RBP4.17□□□□□ -1.74
GABPB1-204ENST00000396464 OR52E8Q6IFG1 317 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 Q6ZSR9 355 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 USP43Q70EL4 1123 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 C16orf82Q7Z2V1 217 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 IFNEQ86WN2 208 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 RALGPS2Q86X27 583 aaPredicted RBP4.17□□□□□ -1.74
GABPB1-204ENST00000396464 SLC22A15Q8IZD6 547 aa4.17□□□□□ -1.74
GABPB1-204ENST00000396464 Q8N402 240 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms