RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 DPRXA6NFQ7 191 aa17.41■□□□□ 0.38
SNCA-203ENST00000394986 ARHGEF9O43307 516 aa17.41■□□□□ 0.38
SNCA-203ENST00000394986 DHHO43323 396 aa17.41■□□□□ 0.38
SNCA-203ENST00000394986 E2F6O75461 281 aa17.41■□□□□ 0.38
SNCA-203ENST00000394986 GOSR1O95249 250 aa17.41■□□□□ 0.38
SNCA-203ENST00000394986 PPP1R3DO95685 299 aa17.41■□□□□ 0.38
SNCA-203ENST00000394986 HOXB6P17509 224 aaKnown RBP17.41■□□□□ 0.38
SNCA-203ENST00000394986 BSPH1Q075Z2 132 aa17.41■□□□□ 0.38
SNCA-203ENST00000394986 MESTQ5EB52 335 aa17.41■□□□□ 0.38
SNCA-203ENST00000394986 ZNF813Q6ZN06 617 aa17.41■□□□□ 0.38
SNCA-203ENST00000394986 ZNF620Q6ZNG0 422 aa17.41■□□□□ 0.38
SNCA-203ENST00000394986 LINC00471Q8N535 108 aa17.41■□□□□ 0.38
SNCA-203ENST00000394986 ARIH2OSQ8N7S6 290 aa17.41■□□□□ 0.38
SNCA-203ENST00000394986 NMD3Q96D46 503 aaKnown RBP17.41■□□□□ 0.38
SNCA-203ENST00000394986 BOD1Q96IK1 185 aa17.41■□□□□ 0.38
SNCA-203ENST00000394986 ZNF570Q96NI8 536 aa17.41■□□□□ 0.38
SNCA-203ENST00000394986 FOXB1Q99853 325 aa17.41■□□□□ 0.38
SNCA-203ENST00000394986 NDEL1Q9GZM8 345 aa17.41■□□□□ 0.38
SNCA-203ENST00000394986 LIME1Q9H400 295 aa17.41■□□□□ 0.38
SNCA-203ENST00000394986 EGLN3Q9H6Z9 239 aa17.41■□□□□ 0.38
SNCA-203ENST00000394986 IER3IP1Q9Y5U9 82 aa17.41■□□□□ 0.38
SNCA-203ENST00000394986 M0R1B8 84 aa17.4■□□□□ 0.38
SNCA-203ENST00000394986 IGFBP1P08833 259 aaPredicted RBP17.4■□□□□ 0.38
SNCA-203ENST00000394986 UBE2NP61088 152 aaKnown RBP17.4■□□□□ 0.38
SNCA-203ENST00000394986 KPNB1Q14974 876 aaKnown RBP17.4■□□□□ 0.38
SNCA-203ENST00000394986 RFX4Q33E94 735 aa17.4■□□□□ 0.38
SNCA-203ENST00000394986 NCMAPQ5T1S8 102 aa17.4■□□□□ 0.38
SNCA-203ENST00000394986 FAM205BPQ63HN1 556 aa17.4■□□□□ 0.38
SNCA-203ENST00000394986 GIPC3Q8TF64 312 aa17.4■□□□□ 0.38
SNCA-203ENST00000394986 NIPSNAP1Q9BPW8 284 aa17.4■□□□□ 0.38
SNCA-203ENST00000394986 PLA2G12AQ9BZM1 189 aa17.4■□□□□ 0.38
SNCA-203ENST00000394986 NGBQ9NPG2 151 aa17.4■□□□□ 0.38
SNCA-203ENST00000394986 STX18Q9P2W9 335 aaKnown RBP17.4■□□□□ 0.38
SNCA-203ENST00000394986 DNAJB9Q9UBS3 223 aa17.4■□□□□ 0.38
SNCA-203ENST00000394986 CSMD1Q96PZ7 3565 aa17.4■□□□□ 0.38
SNCA-203ENST00000394986 A6NIZ1 184 aa17.39■□□□□ 0.38
SNCA-203ENST00000394986 CENPBD1B2RD01 187 aa17.39■□□□□ 0.38
SNCA-203ENST00000394986 SOCS2O14508 198 aa17.39■□□□□ 0.38
SNCA-203ENST00000394986 IMPA2O14732 288 aa17.39■□□□□ 0.38
SNCA-203ENST00000394986 SDHAP31040 664 aa17.39■□□□□ 0.38
SNCA-203ENST00000394986 SLC6A6P31641 620 aa17.39■□□□□ 0.38
SNCA-203ENST00000394986 CAPZA2P47755 286 aa17.39■□□□□ 0.38
SNCA-203ENST00000394986 NR1H2P55055 460 aa17.39■□□□□ 0.38
SNCA-203ENST00000394986 RAP1BP61224 184 aa17.39■□□□□ 0.38
SNCA-203ENST00000394986 RAP1AP62834 184 aa17.39■□□□□ 0.38
SNCA-203ENST00000394986 KRR1Q13601 381 aaKnown RBP17.39■□□□□ 0.38
SNCA-203ENST00000394986 CLEC12AQ5QGZ9 265 aa17.39■□□□□ 0.38
SNCA-203ENST00000394986 DPY19L2P2Q6ZN68 376 aa17.39■□□□□ 0.38
SNCA-203ENST00000394986 MAGEE2Q8TD90 523 aaPredicted RBP17.39■□□□□ 0.38
SNCA-203ENST00000394986 NSMAFQ92636 917 aa17.39■□□□□ 0.38
SNCA-203ENST00000394986 FEVQ99581 238 aa17.39■□□□□ 0.38
SNCA-203ENST00000394986 ALG12Q9BV10 488 aa17.39■□□□□ 0.38
SNCA-203ENST00000394986 DGCR6LQ9BY27 220 aa17.39■□□□□ 0.38
SNCA-203ENST00000394986 PLEKHF2Q9H8W4 249 aa17.39■□□□□ 0.38
SNCA-203ENST00000394986 NTN4Q9HB63 628 aa17.39■□□□□ 0.38
SNCA-203ENST00000394986 PDP1Q9P0J1 537 aaPredicted RBP17.39■□□□□ 0.38
SNCA-203ENST00000394986 MAGED1Q9Y5V3 778 aaPredicted RBP17.39■□□□□ 0.38
SNCA-203ENST00000394986 CDH10Q9Y6N8 788 aa17.39■□□□□ 0.38
SNCA-203ENST00000394986 ABCA4P78363 2273 aa17.39■□□□□ 0.37
SNCA-203ENST00000394986 ARPC4-TTLL3A0A0A6YYG9 625 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 SOX14O95416 240 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 WNT11O96014 354 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 HLA-HP01893 362 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 PRKACGP22612 351 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 SPOCK1Q08629 439 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 PTCHD4Q6ZW05 846 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 OR8D4Q8NGM9 314 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 ERMAPQ96PL5 475 aaPredicted RBP17.38■□□□□ 0.37
SNCA-203ENST00000394986 IFT27Q9BW83 186 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 ESRP2Q9H6T0 727 aaKnown RBP17.38■□□□□ 0.37
SNCA-203ENST00000394986 NOX3Q9HBY0 568 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 TMEM38BQ9NVV0 291 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 MGAT4BQ9UQ53 548 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 AP4S1Q9Y587 144 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 CSMD2Q7Z408 3487 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 XKRYO14609 159 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 CDAP32320 146 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 RPS6KA3P51812 740 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 ZNF133P52736 654 aaPredicted RBP17.38■□□□□ 0.37
SNCA-203ENST00000394986 GK3PQ14409 553 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 C10orf128Q5T292 105 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 ADAM5Q6NVV9 412 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 SLC25A47Q6Q0C1 308 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 ZNF704Q6ZNC4 412 aaPredicted RBP17.38■□□□□ 0.37
SNCA-203ENST00000394986 RASSF6Q6ZTQ3 369 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 ZNF627Q7L945 461 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 KBTBD8Q8NFY9 601 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 PYDC1Q8WXC3 89 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 NEUROG1Q92886 237 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 DUS3LQ96G46 650 aaKnown RBP17.38■□□□□ 0.37
SNCA-203ENST00000394986 SH3GL3Q99963 347 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 TMEM204Q9BSN7 226 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 SEC61A2Q9H9S3 476 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 ARMC1Q9NVT9 282 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 ZNF224Q9NZL3 707 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 RNF115Q9Y4L5 304 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 UGT2A1Q9Y4X1 527 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 LRBAP50851 2863 aa17.38■□□□□ 0.37
SNCA-203ENST00000394986 SLC22A23A1A5C7 686 aa17.37■□□□□ 0.37
SNCA-203ENST00000394986 ABCD4O14678 606 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms