RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 RBMS2Q15434 407 aaKnown RBP16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 KLHL26Q53HC5 615 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 RGS7BPQ6MZT1 257 aaPredicted RBP16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 BPHLQ86WA6 291 aaPredicted RBP16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 ZNF227Q86WZ6 799 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 OR4D10Q8NGI6 311 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 OR51A4Q8NGJ6 313 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 OR8K3Q8NH51 312 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 LIPHQ8WWY8 451 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 PNPLA2Q96AD5 504 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 TOE1Q96GM8 510 aaKnown RBP16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 DGAT2Q96PD7 388 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 GINS4Q9BRT9 223 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 C12orf10Q9HB07 376 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 STEAP1Q9UHE8 339 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 OPN4Q9UHM6 478 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 SLC6A5Q9Y345 797 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 SLCO1B1Q9Y6L6 691 aa16.64■□□□□ 0.25
PCDHA1-202ENST00000394633 TPPPO94811 219 aa16.63■□□□□ 0.25
PCDHA1-202ENST00000394633 IGHV4-34P06331 123 aa16.63■□□□□ 0.25
PCDHA1-202ENST00000394633 NMBP08949 121 aa16.63■□□□□ 0.25
PCDHA1-202ENST00000394633 HOXD4P09016 255 aaPredicted RBP16.63■□□□□ 0.25
PCDHA1-202ENST00000394633 ZP3P21754 424 aa16.63■□□□□ 0.25
PCDHA1-202ENST00000394633 S100A11P31949 105 aa16.63■□□□□ 0.25
PCDHA1-202ENST00000394633 OC90Q02509 493 aaPredicted RBP16.63■□□□□ 0.25
PCDHA1-202ENST00000394633 WBP2NLQ6ICG8 309 aa16.63■□□□□ 0.25
PCDHA1-202ENST00000394633 TSTD1Q8NFU3 115 aa16.63■□□□□ 0.25
PCDHA1-202ENST00000394633 ULBP3Q9BZM4 244 aa16.63■□□□□ 0.25
PCDHA1-202ENST00000394633 OR10A5Q9H207 317 aa16.63■□□□□ 0.25
PCDHA1-202ENST00000394633 MMP25Q9NPA2 562 aa16.63■□□□□ 0.25
PCDHA1-202ENST00000394633 LAMP5Q9UJQ1 280 aa16.63■□□□□ 0.25
PCDHA1-202ENST00000394633 BDP1A6H8Y1 2624 aa16.63■□□□□ 0.25
PCDHA1-202ENST00000394633 C10orf142B7Z368 130 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 CDK2AP1O14519 115 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 ARPC5O15511 151 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 B3GALNT1O75752 331 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 AKR7A3O95154 331 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 TXNDC12O95881 172 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 ASAH2BP0C7U1 165 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 FAUP35544 74 aaKnown RBP16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 EFNB2P52799 333 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 EGR4Q05215 589 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 CD226Q15762 336 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 ODF4Q2M2E3 257 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 MESTQ5EB52 335 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 TMUB2Q71RG4 321 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 BIVMQ86UB2 503 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 ZNF440Q8IYI8 595 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 ABCA7Q8IZY2 2146 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 PRSS35Q8N3Z0 413 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 ZNF676Q8N7Q3 588 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 OR6N2Q8NGY6 317 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 GPBAR1Q8TDU6 330 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 TMEM106AQ96A25 262 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 ZNF524Q96C55 264 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 LPAR4Q99677 370 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 WDR76Q9H967 626 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 PRTFDC1Q9NRG1 225 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 TDRD6O60522 2096 aaKnown RBP16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 CACNA1IQ9P0X4 2223 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 SNAPC5O75971 98 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 PNMTP11086 282 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 ZNF35P13682 527 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 SCAND1P57086 179 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 UBE2MP61081 183 aaKnown RBP16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 GUCA2AQ02747 115 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 FNDC7Q5VTL7 733 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 OR7E24Q6IFN5 339 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 ALKAL2Q6UX46 152 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 Q6ZSR6 202 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 AVL9Q8NBF6 648 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 ZNF417Q8TAU3 575 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 KLHL15Q96M94 604 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 TSPAN32Q96QS1 320 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 CCNL2Q96S94 520 aaPredicted RBP16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 PPA2Q9H2U2 334 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 MED9Q9NWA0 146 aa16.62■□□□□ 0.25
PCDHA1-202ENST00000394633 UBE2QL1A1L167 161 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 HMSDA8MTL9 139 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 CTAG2O75638 210 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 GPANK1O95872 356 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 IGF2P01344 180 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 IGLV3-19P01714 112 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 MAOAP21397 527 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 MST1P26927 711 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 CCR4P51679 360 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 RPL18Q07020 188 aaKnown RBP16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 FUT7Q11130 342 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 KCNAB1Q14722 419 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 GRM7Q14831 915 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 YOD1Q5VVQ6 348 aaPredicted RBP16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 ANKRD16Q6P6B7 361 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 CBLN3Q6UW01 205 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 DPY19L4Q7Z388 723 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 OOSP2Q86WS3 158 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 ZNF615Q8N8J6 731 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 ZSCAN1Q8NBB4 408 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 OR51D1Q8NGF3 324 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 COQ8AQ8NI60 647 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms