RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 FAM26DQ5JW98 314 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 DHRS7BQ6IAN0 325 aaPredicted RBP12.46□□□□□ -0.41
USP49-203ENST00000394253 KREMEN2Q8NCW0 462 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 CPEB3Q8NE35 698 aaKnown RBP12.46□□□□□ -0.41
USP49-203ENST00000394253 L3HYPDHQ96EM0 354 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 A0A1B0GV72 72 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 F2P00734 622 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 GPM6AP51674 278 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 ERVPABLB-1P60509 514 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 RPS26P11Q5JNZ5 115 aaPredicted RBP12.46□□□□□ -0.41
USP49-203ENST00000394253 TMEM182Q6ZP80 229 aaPredicted RBP12.46□□□□□ -0.41
USP49-203ENST00000394253 DCAF4L2Q8NA75 395 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 PADI1Q9ULC6 663 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 TMEM98Q9Y2Y6 226 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 MGMTP16455 207 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 ZP3P21754 424 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 KLRK1P26718 216 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 ZNF93P35789 620 aaPredicted RBP12.46□□□□□ -0.41
USP49-203ENST00000394253 ZNF761Q86XN6 746 aaPredicted RBP12.46□□□□□ -0.41
USP49-203ENST00000394253 ATRNO75882 1429 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 AQP7P3A6NL99 342 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 NXPH2O95156 264 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 PMCHP20382 165 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 NKX2-1P43699 371 aaPredicted RBP12.46□□□□□ -0.41
USP49-203ENST00000394253 PDE7AQ13946 482 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 VGLL4Q14135 290 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 HES1Q14469 280 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 COL5A1-AS1Q5SY13 56 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 STUMQ69YW2 141 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 SCGB1D4Q6XE38 83 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 ADGRA1Q86SQ6 560 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 OR5AR1Q8NGP9 310 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 BCL2L2Q92843 193 aaPredicted RBP12.46□□□□□ -0.41
USP49-203ENST00000394253 DPH7Q9BTV6 452 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 NKX2-4Q9H2Z4 354 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 VEGFAP15692 232 aaPredicted RBP12.46□□□□□ -0.41
USP49-203ENST00000394253 S100A4P26447 101 aaKnown RBP12.46□□□□□ -0.41
USP49-203ENST00000394253 BLVRBP30043 206 aaPredicted RBP12.46□□□□□ -0.41
USP49-203ENST00000394253 C5orf46Q6UWT4 87 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 COMMD6Q7Z4G1 85 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 KLHDC8AQ8IYD2 350 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 OR2L13Q8N349 312 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 COPS9Q8WXC6 57 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 VN1R3Q9BXE9 311 aa12.46□□□□□ -0.41
USP49-203ENST00000394253 GPR85P60893 370 aa12.46□□□□□ -0.42
USP49-203ENST00000394253 MEF2AQ02078 507 aaPredicted RBP12.46□□□□□ -0.42
USP49-203ENST00000394253 AGBL4Q5VU57 503 aa12.46□□□□□ -0.42
USP49-203ENST00000394253 AMIGO3Q86WK7 504 aa12.46□□□□□ -0.42
USP49-203ENST00000394253 OR52B6Q8NGF0 335 aa12.46□□□□□ -0.42
USP49-203ENST00000394253 RPUSD4Q96CM3 377 aaKnown RBP12.46□□□□□ -0.42
USP49-203ENST00000394253 ELOVL3Q9HB03 270 aa12.46□□□□□ -0.42
USP49-203ENST00000394253 CACNA1GO43497 2377 aa12.46□□□□□ -0.42
USP49-203ENST00000394253 PMP2P02689 132 aa12.46□□□□□ -0.42
USP49-203ENST00000394253 TPOP07202 933 aa12.46□□□□□ -0.42
USP49-203ENST00000394253 TAL1P17542 331 aaPredicted RBP12.46□□□□□ -0.42
USP49-203ENST00000394253 FUT1P19526 365 aa12.46□□□□□ -0.42
USP49-203ENST00000394253 OR7A5Q15622 319 aa12.46□□□□□ -0.42
USP49-203ENST00000394253 ZNF787Q6DD87 383 aa12.46□□□□□ -0.42
USP49-203ENST00000394253 SIAH3Q8IW03 269 aa12.46□□□□□ -0.42
USP49-203ENST00000394253 RAD1O60671 282 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 OR5AL1P0C617 328 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 ELAVL3Q14576 367 aaKnown RBP12.45□□□□□ -0.42
USP49-203ENST00000394253 B3GNT8Q7Z7M8 397 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 OR10G3Q8NGC4 313 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 SCAMP5Q8TAC9 235 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 SYT17Q9BSW7 474 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 INPP5KQ9BT40 448 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 TMEM59LQ9UK28 342 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 TOX3O15405 576 aaPredicted RBP12.45□□□□□ -0.42
USP49-203ENST00000394253 AQP9O43315 295 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 CYC1P08574 325 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 MTNR1BP49286 362 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 CLLU1Q5K131 121 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 PIP5KL1Q5T9C9 394 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 LYSMD4Q5XG99 296 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 CAPNS2Q96L46 248 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 GIMAP2Q9UG22 337 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 HS3ST4Q9Y661 456 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 FAM183AA6NL82 134 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 CNN1P51911 297 aaKnown RBP12.45□□□□□ -0.42
USP49-203ENST00000394253 FAM57BQ71RH2 274 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 ZFP62Q8NB50 900 aaPredicted RBP12.45□□□□□ -0.42
USP49-203ENST00000394253 SEH1LQ96EE3 360 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 PHYHIPLQ96FC7 376 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 OR4C12Q96R67 309 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 OCEL1Q9H607 264 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 HSPB8Q9UJY1 196 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 NUP98P52948 1817 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 NPIPB15A6NHN6 443 aaPredicted RBP12.45□□□□□ -0.42
USP49-203ENST00000394253 AHRP35869 848 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 ZNF528Q3MIS6 628 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 MOB3CQ70IA8 216 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 RNF113BQ8IZP6 322 aaKnown RBP12.45□□□□□ -0.42
USP49-203ENST00000394253 OR51A4Q8NGJ6 313 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 TFAP2BQ92481 460 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 ZNF300Q96RE9 604 aaPredicted RBP12.45□□□□□ -0.42
USP49-203ENST00000394253 MBD5Q9P267 1494 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 ABCD4O14678 606 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 TTRP02766 147 aa12.45□□□□□ -0.42
USP49-203ENST00000394253 B2MP61769 119 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms