RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 GAL3ST4Q96RP7 486 aa12.64□□□□□ -0.39
GAPVD1-205ENST00000394084 RTN4RQ9BZR6 473 aa12.64□□□□□ -0.39
GAPVD1-205ENST00000394084 NRSN2Q9GZP1 204 aa12.64□□□□□ -0.39
GAPVD1-205ENST00000394084 STEAP1Q9UHE8 339 aa12.64□□□□□ -0.39
GAPVD1-205ENST00000394084 CDV3Q9UKY7 258 aaKnown RBP12.64□□□□□ -0.39
GAPVD1-205ENST00000394084 FXYD6-FXYD2A0A087WZ82 144 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 OR5K4A6NMS3 321 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 ZNF264O43296 627 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 UTS2O95399 124 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 RENP00797 406 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 CLPSP04118 112 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 HIST1H2ABP04908 130 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 CPN1P15169 458 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 ALOX5APP20292 161 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 CCKBRP32239 447 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 KIR3DL2P43630 455 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 RAP2BP61225 183 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 IGLV3-21P80748 117 aaPredicted RBP12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 MFSD13AQ14CX5 517 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 HIST3H2AQ7L7L0 130 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 ZNF440Q8IYI8 595 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 GALNT11Q8NCW6 608 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 COQ8AQ8NI60 647 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 GPR148Q8TDV2 347 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 HIST1H2ACQ93077 130 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 SLC25A36Q96CQ1 311 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 KLHL15Q96M94 604 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 INTS14Q96SY0 518 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 FXYD6Q9H0Q3 95 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 SLC22A13Q9Y226 551 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 OR2M5A3KFT3 312 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 MCRIP1C9JLW8 97 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 DOK2O60496 412 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 WISP1O95388 367 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 IGHV4-34P06331 123 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 ZNF35P13682 527 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 GTF2F2P13984 249 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 FZD2Q14332 565 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 TOMM34Q15785 309 aaPredicted RBP12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 WDR38Q5JTN6 314 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 BIVMQ86UB2 503 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 CXorf58Q96LI9 332 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 MRI1Q9BV20 369 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 TMEM138Q9NPI0 162 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 SOHLH2Q9NX45 425 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 CYP8B1Q9UNU6 501 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 LRP4O75096 1905 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 UBE2QL1A1L167 161 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 GOSR2O14653 212 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 XRCC3O43542 346 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 ZNF254O75437 659 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 ACSM4P0C7M7 580 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 POU3F4P49335 361 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 H2BFSP57053 126 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 FNDC7Q5VTL7 733 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 OR51S1Q8NGJ8 323 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 ZNF417Q8TAU3 575 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 NKX2-4Q9H2Z4 354 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 ELOVL3Q9HB03 270 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 HS3ST3A1Q9Y663 406 aa12.63□□□□□ -0.39
GAPVD1-205ENST00000394084 H7C417 338 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 SUSD5O60279 629 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 CTAG2O75638 210 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 NUDT14O95848 222 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 EPHA4P54764 986 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 DMWDQ09019 674 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 MEP1BQ16820 701 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 BPHLQ86WA6 291 aaPredicted RBP12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 SDR16C5Q8N3Y7 309 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 MTFP1Q9UDX5 166 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 PRODH2Q9UF12 536 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 SLC6A5Q9Y345 797 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 SPEGQ15772 3267 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 TRBV5-7A0A0A0MS05 114 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 SPTY2D1-AS1A0A0U1RR47 76 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 GGT3PA6NGU5 568 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 PRAMEF26H0Y7S4 382 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 HCRTR2O43614 444 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 NSA2O95478 260 aaKnown RBP12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 LDOC1O95751 146 aaPredicted RBP12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 IL5P05113 134 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 ITGA5P08648 1049 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 APEHP13798 732 aaKnown RBP12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 SKP1P63208 163 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 RBMS2Q15434 407 aaKnown RBP12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 NHLRC3Q5JS37 347 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 DCAF12L2Q5VW00 463 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 PLPP7Q8NBV4 271 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 C4orf45Q96LM5 186 aa12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 MYEF2Q9P2K5 600 aaKnown RBP12.62□□□□□ -0.39
GAPVD1-205ENST00000394084 SNRPGP15A8MWD9 76 aa12.61□□□□□ -0.39
GAPVD1-205ENST00000394084 SMAD9O15198 467 aaKnown RBP12.61□□□□□ -0.39
GAPVD1-205ENST00000394084 C4BPBP20851 252 aa12.61□□□□□ -0.39
GAPVD1-205ENST00000394084 FAUP35544 74 aaKnown RBP12.61□□□□□ -0.39
GAPVD1-205ENST00000394084 MUC20Q8N307 709 aaPredicted RBP12.61□□□□□ -0.39
GAPVD1-205ENST00000394084 CHST6Q9GZX3 395 aa12.61□□□□□ -0.39
GAPVD1-205ENST00000394084 ARL6Q9H0F7 186 aa12.61□□□□□ -0.39
GAPVD1-205ENST00000394084 GMEB2Q9UKD1 530 aa12.61□□□□□ -0.39
GAPVD1-205ENST00000394084 hCG_1807616A0A1W2PRN6 198 aa12.61□□□□□ -0.39
GAPVD1-205ENST00000394084 TMEM212A6NML5 194 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms