RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 CD1CP29017 333 aa3□□□□□ -1.93
SNORA40.4-201ENST00000390971 SSR1P43307 286 aaKnown RBP3□□□□□ -1.93
SNORA40.4-201ENST00000390971 YAP1P46937 504 aaKnown RBP3□□□□□ -1.93
SNORA40.4-201ENST00000390971 ATP1B3P54709 279 aa3□□□□□ -1.93
SNORA40.4-201ENST00000390971 ESRRGP62508 458 aa3□□□□□ -1.93
SNORA40.4-201ENST00000390971 GINS1Q14691 196 aa3□□□□□ -1.93
SNORA40.4-201ENST00000390971 PRR9Q5T870 116 aa3□□□□□ -1.93
SNORA40.4-201ENST00000390971 ENPP6Q6UWR7 440 aa3□□□□□ -1.93
SNORA40.4-201ENST00000390971 TMEM135Q86UB9 458 aa3□□□□□ -1.93
SNORA40.4-201ENST00000390971 GMCL1P1Q8NEA9 526 aa3□□□□□ -1.93
SNORA40.4-201ENST00000390971 OR5D13Q8NGL4 314 aa3□□□□□ -1.93
SNORA40.4-201ENST00000390971 RGP1Q92546 391 aaPredicted RBP3□□□□□ -1.93
SNORA40.4-201ENST00000390971 MTMR9Q96QG7 549 aa3□□□□□ -1.93
SNORA40.4-201ENST00000390971 PPA2Q9H2U2 334 aa3□□□□□ -1.93
SNORA40.4-201ENST00000390971 HMG20AQ9NP66 347 aa3□□□□□ -1.93
SNORA40.4-201ENST00000390971 SH3BGRL2Q9UJC5 107 aa3□□□□□ -1.93
SNORA40.4-201ENST00000390971 CDHR2Q9BYE9 1310 aa2.99□□□□□ -1.93
SNORA40.4-201ENST00000390971 DOCK9Q9BZ29 2069 aa2.99□□□□□ -1.93
SNORA40.4-201ENST00000390971 TET2Q6N021 2002 aaPredicted RBP2.99□□□□□ -1.93
SNORA40.4-201ENST00000390971 A0A0B4J2A0 478 aa2.99□□□□□ -1.93
SNORA40.4-201ENST00000390971 IGHV5-10-1A0A0J9YXX1 117 aa2.99□□□□□ -1.93
SNORA40.4-201ENST00000390971 ZNF726A6NNF4 738 aa2.99□□□□□ -1.93
SNORA40.4-201ENST00000390971 RBFOX2O43251 390 aaKnown RBP eCLIP2.99□□□□□ -1.93
SNORA40.4-201ENST00000390971 IGHV1-8P0DP01 117 aa2.99□□□□□ -1.93
SNORA40.4-201ENST00000390971 NCK1P16333 377 aa2.99□□□□□ -1.93
SNORA40.4-201ENST00000390971 POU2AF1Q16633 256 aa2.99□□□□□ -1.93
SNORA40.4-201ENST00000390971 CFAP157Q5JU67 520 aa2.99□□□□□ -1.93
SNORA40.4-201ENST00000390971 FAM83FQ8NEG4 500 aaPredicted RBP2.99□□□□□ -1.93
SNORA40.4-201ENST00000390971 SCFD1Q8WVM8 642 aa2.99□□□□□ -1.93
SNORA40.4-201ENST00000390971 C10orf35Q96D05 121 aa2.99□□□□□ -1.93
SNORA40.4-201ENST00000390971 HSFY1Q96LI6 401 aa2.99□□□□□ -1.93
SNORA40.4-201ENST00000390971 RARRES2Q99969 163 aa2.99□□□□□ -1.93
SNORA40.4-201ENST00000390971 ULBP2Q9BZM5 246 aa2.99□□□□□ -1.93
SNORA40.4-201ENST00000390971 AZI2Q9H6S1 392 aa2.99□□□□□ -1.93
SNORA40.4-201ENST00000390971 ISYNA1Q9NPH2 558 aa2.99□□□□□ -1.93
SNORA40.4-201ENST00000390971 SHPKQ9UHJ6 478 aa2.99□□□□□ -1.93
SNORA40.4-201ENST00000390971 ADAM28Q9UKQ2 775 aa2.99□□□□□ -1.93
SNORA40.4-201ENST00000390971 CDH9Q9ULB4 789 aa2.99□□□□□ -1.93
SNORA40.4-201ENST00000390971 IGHV3-74A0A0B4J1X5 117 aa2.98□□□□□ -1.93
SNORA40.4-201ENST00000390971 TRAV39A0A0B4J263 110 aa2.98□□□□□ -1.93
SNORA40.4-201ENST00000390971 ERLIN2O94905 339 aa2.98□□□□□ -1.93
SNORA40.4-201ENST00000390971 MPZL1O95297 269 aa2.98□□□□□ -1.93
SNORA40.4-201ENST00000390971 POLR2MP0CAP2 368 aa2.98□□□□□ -1.93
SNORA40.4-201ENST00000390971 OGDHQ02218 1023 aa2.98□□□□□ -1.93
SNORA40.4-201ENST00000390971 SYCNQ0VAF6 134 aa2.98□□□□□ -1.93
SNORA40.4-201ENST00000390971 MRPL28Q13084 256 aaKnown RBP2.98□□□□□ -1.93
SNORA40.4-201ENST00000390971 PON3Q15166 354 aa2.98□□□□□ -1.93
SNORA40.4-201ENST00000390971 ZNF684Q5T5D7 378 aa2.98□□□□□ -1.93
SNORA40.4-201ENST00000390971 DHDDSQ86SQ9 333 aa2.98□□□□□ -1.93
SNORA40.4-201ENST00000390971 RIMKLAQ8IXN7 391 aa2.98□□□□□ -1.93
SNORA40.4-201ENST00000390971 PUSL1Q8N0Z8 303 aaKnown RBP2.98□□□□□ -1.93
SNORA40.4-201ENST00000390971 OR2G2Q8NGZ5 317 aa2.98□□□□□ -1.93
SNORA40.4-201ENST00000390971 OR4S2Q8NH73 311 aa2.98□□□□□ -1.93
SNORA40.4-201ENST00000390971 LKAAEAR1Q8TD35 194 aa2.98□□□□□ -1.93
SNORA40.4-201ENST00000390971 MRPL37Q9BZE1 423 aaKnown RBP2.98□□□□□ -1.93
SNORA40.4-201ENST00000390971 KIAA1257Q9ULG3 409 aa2.98□□□□□ -1.93
SNORA40.4-201ENST00000390971 GPATCH8Q9UKJ3 1502 aaKnown RBP2.98□□□□□ -1.93
SNORA40.4-201ENST00000390971 RPL36A-HNRNPH2H7BZ11 118 aa2.97□□□□□ -1.93
SNORA40.4-201ENST00000390971 CCL21O00585 134 aa2.97□□□□□ -1.93
SNORA40.4-201ENST00000390971 RRP8O43159 456 aaKnown RBP2.97□□□□□ -1.93
SNORA40.4-201ENST00000390971 SNNO75324 88 aaPredicted RBP2.97□□□□□ -1.93
SNORA40.4-201ENST00000390971 GABARAPO95166 117 aa2.97□□□□□ -1.93
SNORA40.4-201ENST00000390971 C2P06681 752 aa2.97□□□□□ -1.93
SNORA40.4-201ENST00000390971 DESP17661 470 aa2.97□□□□□ -1.93
SNORA40.4-201ENST00000390971 CSNK1A1P48729 337 aa2.97□□□□□ -1.93
SNORA40.4-201ENST00000390971 ARG2P78540 354 aa2.97□□□□□ -1.93
SNORA40.4-201ENST00000390971 ATAD3BQ5T9A4 648 aa2.97□□□□□ -1.93
SNORA40.4-201ENST00000390971 KDM7AQ6ZMT4 941 aa2.97□□□□□ -1.93
SNORA40.4-201ENST00000390971 OR52P1PQ8NH57 321 aa2.97□□□□□ -1.93
SNORA40.4-201ENST00000390971 RNF157Q96PX1 679 aa2.97□□□□□ -1.93
SNORA40.4-201ENST00000390971 CNN2Q99439 309 aaKnown RBP2.97□□□□□ -1.93
SNORA40.4-201ENST00000390971 TMEM43Q9BTV4 400 aa2.97□□□□□ -1.93
SNORA40.4-201ENST00000390971 SPNS1Q9H2V7 528 aa2.97□□□□□ -1.93
SNORA40.4-201ENST00000390971 NMRAL1Q9HBL8 299 aa2.97□□□□□ -1.93
SNORA40.4-201ENST00000390971 PCP4L1A6NKN8 68 aa2.96□□□□□ -1.94
SNORA40.4-201ENST00000390971 LINC00869P0C866 280 aa2.96□□□□□ -1.94
SNORA40.4-201ENST00000390971 ATP5C1P36542 298 aaKnown RBP2.96□□□□□ -1.94
SNORA40.4-201ENST00000390971 VHLP40337 213 aa2.96□□□□□ -1.94
SNORA40.4-201ENST00000390971 CDKN2BP42772 138 aa2.96□□□□□ -1.94
SNORA40.4-201ENST00000390971 MAGEA8P43361 318 aa2.96□□□□□ -1.94
SNORA40.4-201ENST00000390971 CACNG7P62955 275 aa2.96□□□□□ -1.94
SNORA40.4-201ENST00000390971 ZNF92Q03936 586 aa2.96□□□□□ -1.94
SNORA40.4-201ENST00000390971 TCP10Q12799 353 aa2.96□□□□□ -1.94
SNORA40.4-201ENST00000390971 DUX4L9Q6RFH8 374 aaPredicted RBP2.96□□□□□ -1.94
SNORA40.4-201ENST00000390971 NCCRP1Q6ZVX7 275 aaPredicted RBP2.96□□□□□ -1.94
SNORA40.4-201ENST00000390971 HDDC2Q7Z4H3 204 aa2.96□□□□□ -1.94
SNORA40.4-201ENST00000390971 WDR86Q86TI4 376 aa2.96□□□□□ -1.94
SNORA40.4-201ENST00000390971 LHFPL3Q86UP9 236 aa2.96□□□□□ -1.94
SNORA40.4-201ENST00000390971 FAM110BQ8TC76 370 aa2.96□□□□□ -1.94
SNORA40.4-201ENST00000390971 STMN2Q93045 179 aa2.96□□□□□ -1.94
SNORA40.4-201ENST00000390971 TM4SF18Q96CE8 201 aa2.96□□□□□ -1.94
SNORA40.4-201ENST00000390971 SH3GL1Q99961 368 aa2.96□□□□□ -1.94
SNORA40.4-201ENST00000390971 ERP44Q9BS26 406 aa2.96□□□□□ -1.94
SNORA40.4-201ENST00000390971 C12orf10Q9HB07 376 aa2.96□□□□□ -1.94
SNORA40.4-201ENST00000390971 PCM1Q15154 2024 aa2.96□□□□□ -1.94
SNORA40.4-201ENST00000390971 IGLV1-50A0A075B6I6 118 aa2.95□□□□□ -1.94
SNORA40.4-201ENST00000390971 BICDL2A1A5D9 508 aa2.95□□□□□ -1.94
SNORA40.4-201ENST00000390971 EIF3GO75821 320 aaKnown RBP eCLIP2.95□□□□□ -1.94
SNORA40.4-201ENST00000390971 GUCA1CO95843 209 aa2.95□□□□□ -1.94
SNORA40.4-201ENST00000390971 FABP3P05413 133 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms