RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 CPNE4Q96A23 557 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SLAMF9Q96A28 289 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MRPL24Q96A35 216 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 EXOC4Q96A65 974 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PTX4Q96A99 478 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 JAKMIP2Q96AA8 810 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NTAN1Q96AB6 310 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 APOBEC3DQ96AK3 386 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TMEM143Q96AN5 459 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RPEQ96AT9 228 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 VPS33AQ96AX1 596 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 EEF1AKMT3Q96AZ1 226 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 UBE2WQ96B02 151 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TMEM45BQ96B21 275 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CREB3L1Q96BA8 519 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SPSB1Q96BD6 273 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TADA1Q96BN2 335 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SGK3Q96BR1 496 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 C3orf49Q96BT1 292 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 S100PBPQ96BU1 408 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PTERQ96BW5 349 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MOB3AQ96BX8 217 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 FGGYQ96C11 551 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ULK4Q96C45 1275 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 BIRC7Q96CA5 298 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 FBXL8Q96CD0 374 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TM4SF18Q96CE8 201 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NXNL1Q96CM4 212 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 FLYWCH2Q96CP2 140 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TUBGCP3Q96CW5 907 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RAB39BQ96DA2 213 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 DNAJC19Q96DA6 116 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 FXYD5Q96DB9 178 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 BPIFA2Q96DR5 249 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ASB9Q96DX5 294 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 IQCDQ96DY2 449 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RAB3CQ96E17 227 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SPACA9Q96E40 222 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SEH1LQ96EE3 360 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 KIF1BPQ96EK5 621 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RNF125Q96EQ8 232 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 DTNBP1Q96EV8 351 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 WDR34Q96EX3 536 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ADAT3Q96EY9 351 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 C14orf79Q96F83 325 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RRNAD1Q96FB5 475 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PIK3IP1Q96FE7 263 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ELMOD3Q96FG2 381 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 STAMBPL1Q96FJ0 436 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GALNT14Q96FL9 552 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 DTD2Q96FN9 168 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 OTUB1Q96FW1 271 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PGM2Q96G03 612 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 EEF2KMTQ96G04 330 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MED8Q96G25 268 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF274Q96GC6 653 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 VMP1Q96GC9 406 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PDXPQ96GD0 296 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 AURKBQ96GD4 344 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 FAHD2AQ96GK7 314 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PAGE5Q96GU1 130 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 C5orf30Q96GV9 206 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ZC2HC1AQ96GY0 325 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC41A3Q96GZ6 507 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 COQ2Q96H96 371 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ERO1AQ96HE7 468 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TMEM80Q96HE8 168 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SMIM10Q96HG1 83 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CCDC34Q96HJ3 373 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 OXNAD1Q96HP4 312 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PGAM5Q96HS1 289 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MRFAP1L1Q96HT8 127 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RBM17Q96I25 401 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SUCLG2Q96I99 432 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TMEM101Q96IK0 257 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 METTL2AQ96IZ6 378 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 COG3Q96JB2 828 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 VPS50Q96JG6 964 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MAGED4Q96JG8 741 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 FEM1CQ96JP0 617 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SERAC1Q96JX3 654 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF514Q96K75 400 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 KCNS1Q96KK3 526 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 OR10C1Q96KK4 312 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM210BQ96KR6 192 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 BTN2A3PQ96KV6 586 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SPATA17Q96L03 361 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 FCRL1Q96LA6 429 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PGLYRP4Q96LB8 373 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 BMFQ96LC9 184 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 C12orf42Q96LP6 360 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 C1orf74Q96LT6 269 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 IGF2BP2-AS1Q96M15 143 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 LRGUKQ96M69 825 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 FER1L6-AS2Q96M78 137 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 Q96M85 177 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CCDC138Q96M89 665 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 AK8Q96MA6 479 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 DRC1Q96MC2 740 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 C9orf85Q96MD7 179 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms