RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 SYCNQ0VAF6 134 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 IRF3Q14653 427 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 CDK5R1Q15078 307 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 TGFBIQ15582 683 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 TRIP10Q15642 601 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 CEBPEQ15744 281 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 CST6Q15828 149 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 FAM98BQ52LJ0 330 aaKnown RBP-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 GDF5OSQ5U4N7 250 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 FAM47EQ6ZV65 393 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 ASRGL1Q7L266 308 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 ARMCX2Q7L311 632 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 SLC26A11Q86WA9 606 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 C9orf62Q8N4C0 152 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 TEX26Q8N6G2 289 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 TEX19Q8NA77 164 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 FAM71CQ8NEG0 241 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 OR4D9Q8NGE8 314 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 OR52R1Q8NGF1 315 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 OR5M1Q8NGP8 315 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 OR51F2Q8NH61 342 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 EXOSC8Q96B26 276 aaKnown RBP-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 MALSU1Q96EH3 234 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 C16orf58Q96GQ5 468 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 RPGRIP1Q96KN7 1286 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 SAMD8Q96LT4 415 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 C9orf85Q96MD7 179 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 LRRC3BQ96PB8 259 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 GCNAQ96QF7 691 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 MAP7D2Q96T17 732 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 MLPHQ9BV36 600 aaPredicted RBP-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 GCOM2Q9BZD3 368 aaPredicted RBP-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 C8orf17Q9NRJ1 99 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 OR12D3Q9UGF7 316 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 TFR2Q9UP52 801 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 SLC17A4Q9Y2C5 497 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 GPR52Q9Y2T5 361 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 STARD10Q9Y365 291 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 PPIL1Q9Y3C6 166 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 WDR45Q9Y484 360 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 DISP2A7MBM2 1401 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 ADGRB2O60241 1585 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 TANC1Q9C0D5 1861 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 MSH6P52701 1360 aa-1.61□□□□□ -2.67
RNU6-540P-201ENST00000384622 ABCC10Q5T3U5 1492 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 MYO3BQ8WXR4 1341 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 PEAK1Q9H792 1746 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 IGHV3-64A0A075B6Q5 118 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 IGHV3OR16-8A0A075B7F1 116 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 TRBV6-7A0A0A0MS04 114 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 A0A0A6YYH2 397 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 TRAV8-6A0A0B4J262 113 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 ODAMA1E959 279 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 RNF222A6NCQ9 220 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 IZUMO1RA6ND01 250 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 A6NJ64 397 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 BOLA2-SMG1P6H3BVE0 249 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 ANGPT2O15123 496 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 ZNF264O43296 627 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 DUSP11O75319 330 aaKnown RBP-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 ZNF254O75437 659 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 CIAO1O76071 339 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 NDUFB2O95178 105 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 LRATO95237 230 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 IFNA5P01569 189 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 SLC35G4P0C7Q5 338 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 SLC35G6P0C7Q6 338 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 CCL5P13501 91 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 FOLR1P15328 257 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 CPN2P22792 545 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 TSPOP30536 169 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 ACAA2P42765 397 aaKnown RBP-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 ACTR2P61160 394 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 YPEL3P61236 119 aaPredicted RBP-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 RPL37AP61513 92 aaKnown RBP-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 PSG9Q00887 426 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 C2orf54Q08AI8 447 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 NEXNQ0ZGT2 675 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 CDC20Q12834 499 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 SLAMF1Q13291 335 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 NPTX1Q15818 432 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 BATFQ16520 125 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 ZNF699Q32M78 642 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 ACER2Q5QJU3 275 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 PHYHD1Q5SRE7 291 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 SLC9C2Q5TAH2 1124 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 ZNF322Q6U7Q0 402 aaPredicted RBP-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 TMPRSS11AQ6ZMR5 421 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 TMEM136Q6ZRR5 245 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 OTOAQ7RTW8 1153 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 C16orf62Q7Z3J2 963 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 MOGAT3Q86VF5 341 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 STPG2Q8N412 459 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 RIBC1Q8N443 379 aaPredicted RBP-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 TMEM156Q8N614 296 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 SMPDL3AQ92484 453 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 UFD1Q92890 307 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 TSACCQ96A04 125 aaPredicted RBP-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 ACY3Q96HD9 319 aa-1.62□□□□□ -2.67
RNU6-540P-201ENST00000384622 GAD1Q99259 594 aa-1.62□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms