RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 C4orf36Q96KX1 117 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 FER1L6-AS2Q96M78 137 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 CMTM3Q96MX0 182 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 KCNN2Q9H2S1 579 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 TRIM36Q9NQ86 728 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 TMEM5Q9Y2B1 443 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 DTX4Q9Y2E6 619 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 TRAV27A0A087WT01 109 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 NSG1A0A0A6YYJ2 146 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 TMEM8BA6NDV4 472 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 OR2W5A6NFC9 320 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 PIN1P1O15428 100 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 PRKAR1AP10644 381 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 IFI30P13284 250 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 OR12D2P58182 307 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 AIMP2Q13155 320 aaKnown RBP6.97□□□□□ -1.29
CDKL5-202ENST00000379996 FGFBP1Q14512 234 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 CDK5R1Q15078 307 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 TM4SF20Q53R12 229 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 ZNF321PQ8N8H1 164 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 OR13C5Q8NGS8 318 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 ENKURQ8TC29 256 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 LIPHQ8WWY8 451 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 SMPDL3BQ92485 455 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 CNOT9Q92600 299 aaKnown RBP6.97□□□□□ -1.29
CDKL5-202ENST00000379996 ZNF524Q96C55 264 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 SMIM19Q96E16 107 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 ZNF559Q9BR84 538 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 THAP7Q9BT49 309 aaPredicted RBP6.97□□□□□ -1.29
CDKL5-202ENST00000379996 SCNM1Q9BWG6 230 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 RERGLQ9H628 205 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 EXOSC3Q9NQT5 275 aaKnown RBP6.97□□□□□ -1.29
CDKL5-202ENST00000379996 BAIAP2Q9UQB8 552 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 RASD1Q9Y272 281 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 NPFFR2Q9Y5X5 522 aa6.97□□□□□ -1.29
CDKL5-202ENST00000379996 WDFY3Q8IZQ1 3526 aa6.96□□□□□ -1.29
CDKL5-202ENST00000379996 IGKV1D-42A0A075B6H8 117 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 AKR7A2O43488 359 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 CAPZA2P47755 286 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 PITPNBP48739 271 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 RRADP55042 308 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 MLF1P58340 268 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 MADCAM1Q13477 382 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 LINC01590Q5TEZ4 76 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 MZT2BQ6NZ67 158 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 CREB3L2Q70SY1 520 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 CDH24Q86UP0 819 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 UBE2J2Q8N2K1 259 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 BCORP1Q8N888 145 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 ZPLD1Q8TCW7 415 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 NINJ1Q92982 152 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 ARSGQ96EG1 525 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 WBP1Q96G27 269 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 P4HTMQ9NXG6 502 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 MYOTQ9UBF9 498 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 ELF5Q9UKW6 265 aaPredicted RBP6.96□□□□□ -1.3
CDKL5-202ENST00000379996 IGLV3-32A0A0A0MS00 114 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 A0A1B0GWA3 101 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 SMLR1H3BR10 107 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 REM1O75628 298 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 MT-ND5P03915 603 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 EPXP11678 715 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 PEPDP12955 493 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 MECP2P51608 486 aaKnown RBP6.96□□□□□ -1.3
CDKL5-202ENST00000379996 RAG2P55895 527 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 TAS2R43P59537 309 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 ZP1P60852 638 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 Q0VFX4 171 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 SNTA1Q13424 505 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 GPR68Q15743 365 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 NTRK2Q16620 822 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 PLET1Q6UQ28 207 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 IGFL2Q6UWQ7 119 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 UTS2BQ765I0 119 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 FAM122BQ7Z309 247 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 NUP54Q7Z3B4 507 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 CISD2Q8N5K1 135 aaKnown RBP6.96□□□□□ -1.3
CDKL5-202ENST00000379996 COX18Q8N8Q8 333 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 NPEPL1Q8NDH3 523 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 OR11H4Q8NGC9 324 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 SLC25A38Q96DW6 304 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 UTP23Q9BRU9 249 aaKnown RBP6.96□□□□□ -1.3
CDKL5-202ENST00000379996 KRCC1Q9NPI7 259 aaPredicted RBP6.96□□□□□ -1.3
CDKL5-202ENST00000379996 COPS3Q9UNS2 423 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 CACNG2Q9Y698 323 aa6.96□□□□□ -1.3
CDKL5-202ENST00000379996 TRBV23-1A0A0A0MS06 115 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 LINC00854A0A1B0GVQ3 168 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 ADAM10O14672 748 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 PPM1BO75688 479 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 RCBTB2O95199 551 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 PGDP52209 483 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 PRR20EP86478 221 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 PRR20CP86479 221 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 PRR20DP86480 221 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 PRR20BP86481 221 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 PRR20AP86496 221 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 KLHL26Q53HC5 615 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 TRIQKQ629K1 86 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 FCRLBQ6BAA4 426 aa6.95□□□□□ -1.3
CDKL5-202ENST00000379996 SHISA2Q6UWI4 295 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms