RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 PCDHB16Q9NRJ7 776 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 CLEC5AQ9NY25 188 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 RARRES3Q9UL19 164 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 COL4A2P08572 1712 aa9.82□□□□□ -0.84
NEDD9-201ENST00000379433 EFCAB7A8K855 629 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 ARHGEF9O43307 516 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 CYC1P08574 325 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 CD3GP09693 182 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 TFPIP10646 304 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 RAB4AP20338 218 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 LCN1P31025 176 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 TNFSF8P32971 234 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 PSMD4P55036 377 aaKnown RBP9.81□□□□□ -0.84
NEDD9-201ENST00000379433 GPLD1P80108 840 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 PRKCDQ05655 676 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 BIKQ13323 160 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 PON3Q15166 354 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 TMEM201Q5SNT2 666 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 IDNKQ5T6J7 187 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 NXNL2Q5VZ03 156 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 STEAP3Q658P3 488 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 ZNF613Q6PF04 617 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 D2HGDHQ8N465 521 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 C17orf47Q8NEP4 570 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 ZNF721Q8TF20 911 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 KCTD7Q96MP8 289 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 MED11Q9P086 117 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 DNAJC13O75165 2243 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 IGHV5-10-1A0A0J9YXX1 117 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 TRBV11-1A0A0K0K1C0 115 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 HTR1FP30939 366 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 SLC6A6P31641 620 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 RORCP51449 518 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 DEFA6Q01524 100 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 EBPQ15125 230 aaKnown RBP9.81□□□□□ -0.84
NEDD9-201ENST00000379433 NR0B2Q15466 257 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 ELAVL1Q15717 326 aaKnown RBP9.81□□□□□ -0.84
NEDD9-201ENST00000379433 PLK5Q496M5 336 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 ZNF813Q6ZN06 617 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 ETV3LQ6ZN32 361 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 TRILQ7L0X0 811 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 GDPD3Q7L5L3 318 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 CLDN23Q96B33 292 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 PDCD1LG2Q9BQ51 273 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 OR10A4Q9H209 315 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 TAS2R10Q9NYW0 307 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 PHF3Q92576 2039 aaKnown RBP9.81□□□□□ -0.84
NEDD9-201ENST00000379433 ERVH48-1M5A8F1 160 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 NDUFB2O95178 105 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 LYPD3O95274 346 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 HIST1H2ABP04908 130 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 NDUFB7P17568 137 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 MLLT11Q13015 90 aaPredicted RBP9.81□□□□□ -0.84
NEDD9-201ENST00000379433 HIST3H2AQ7L7L0 130 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 OR5J2Q8NH18 312 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 TNFRSF14Q92956 283 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 HIST1H2ACQ93077 130 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 MRPL48Q96GC5 212 aaKnown RBP9.81□□□□□ -0.84
NEDD9-201ENST00000379433 WWTR1Q9GZV5 400 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 KLRF1Q9NZS2 232 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 PCDHGB2Q9Y5G2 931 aa9.81□□□□□ -0.84
NEDD9-201ENST00000379433 A0A1B0GTH9 108 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 OR6C68A6NDL8 312 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 AHRRA9YTQ3 701 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 FAM25AB3EWG3 89 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 FAM25CB3EWG5 89 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 FAM25GB3EWG6 89 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 AKR7A3O95154 331 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 PLATP00750 562 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 CLPSP04118 112 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 PIPP12273 146 aaPredicted RBP9.8□□□□□ -0.84
NEDD9-201ENST00000379433 ZNF28P17035 718 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 PPICP45877 212 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 EMP2P54851 167 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.8□□□□□ -0.84
NEDD9-201ENST00000379433 TMEM71Q6P5X7 295 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 TMPRSS11AQ6ZMR5 421 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 KANSL1Q7Z3B3 1105 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 C17orf82Q86X59 251 aaPredicted RBP9.8□□□□□ -0.84
NEDD9-201ENST00000379433 PPP1R3BQ86XI6 285 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 S100ZQ8WXG8 99 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 MR1Q95460 341 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 SLC46A1Q96NT5 459 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 GFM1Q96RP9 751 aaKnown RBP9.8□□□□□ -0.84
NEDD9-201ENST00000379433 CCNL2Q96S94 520 aaPredicted RBP9.8□□□□□ -0.84
NEDD9-201ENST00000379433 TRAF4Q9BUZ4 470 aaPredicted RBP9.8□□□□□ -0.84
NEDD9-201ENST00000379433 ZNF416Q9BWM5 594 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 ANKRD19PQ9H560 264 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 SMURF1Q9HCE7 757 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 NDUFB11Q9NX14 153 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 IL19Q9UHD0 177 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 IKZF2Q9UKS7 526 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 DOCK7Q96N67 2140 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 EML5Q05BV3 1969 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 SHISA3A0PJX4 238 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 KDM4EB2RXH2 506 aaPredicted RBP9.8□□□□□ -0.84
NEDD9-201ENST00000379433 AKAP8O43823 692 aaKnown RBP9.8□□□□□ -0.84
NEDD9-201ENST00000379433 EIF1BO60739 113 aaKnown RBP9.8□□□□□ -0.84
NEDD9-201ENST00000379433 IFNGP01579 166 aa9.8□□□□□ -0.84
NEDD9-201ENST00000379433 MST1P26927 711 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms