RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 TMEM53Q6P2H8 277 aa15.13■□□□□ 0.01
PDLIM4-202ENST00000379018 PIWIL3Q7Z3Z3 882 aaKnown RBP15.13■□□□□ 0.01
PDLIM4-202ENST00000379018 LSMEM1Q8N8F7 131 aa15.13■□□□□ 0.01
PDLIM4-202ENST00000379018 ANKRD42Q8N9B4 389 aa15.13■□□□□ 0.01
PDLIM4-202ENST00000379018 CCL17Q92583 94 aa15.13■□□□□ 0.01
PDLIM4-202ENST00000379018 RAB1CQ92928 201 aa15.13■□□□□ 0.01
PDLIM4-202ENST00000379018 SLC35B4Q969S0 331 aa15.13■□□□□ 0.01
PDLIM4-202ENST00000379018 TMEM27Q9HBJ8 222 aa15.13■□□□□ 0.01
PDLIM4-202ENST00000379018 BCL2L10Q9HD36 194 aa15.13■□□□□ 0.01
PDLIM4-202ENST00000379018 MRPL39Q9NYK5 338 aaKnown RBP15.13■□□□□ 0.01
PDLIM4-202ENST00000379018 SLC13A4Q9UKG4 626 aa15.13■□□□□ 0.01
PDLIM4-202ENST00000379018 SLC22A23A1A5C7 686 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 TRPC5OSA6NMA1 111 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 CLIC1O00299 241 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 PLPP3O14495 311 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 TM9SF1O15321 606 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 SPRY3O43610 288 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 FARS2O95363 451 aaKnown RBP15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 HKR1P10072 659 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 CCNOP22674 350 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 POLR2JP52435 117 aaKnown RBP15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 TBC1D28Q2M2D7 210 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 MIDNQ504T8 468 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 ARMCX4Q5H9R4 360 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 SPATA46Q5T0L3 261 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 GCNT6Q5T4J0 391 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 SLC2A7Q6PXP3 512 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 TREML4Q6UXN2 200 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 WDR88Q6ZMY6 472 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 PXKQ7Z7A4 578 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 TREML1Q86YW5 311 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 OR4K5Q8NGD3 323 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 TAF15Q92804 592 aaKnown RBP eCLIP15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 RAD21L1Q9H4I0 556 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 UNKLQ9H9P5 680 aaKnown RBP15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 NTN4Q9HB63 628 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 TMEM38BQ9NVV0 291 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 GLTPQ9NZD2 209 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 OPN4Q9UHM6 478 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 TRRAPQ9Y4A5 3859 aa15.12■□□□□ 0.01
PDLIM4-202ENST00000379018 IGLV3-9A0A075B6K5 115 aa15.11■□□□□ 0.01
PDLIM4-202ENST00000379018 A0A0B4J2E0 115 aa15.11■□□□□ 0.01
PDLIM4-202ENST00000379018 A0A1B0GX12 115 aa15.11■□□□□ 0.01
PDLIM4-202ENST00000379018 DNAJC9-AS1A6NH13 148 aa15.11■□□□□ 0.01
PDLIM4-202ENST00000379018 HDAC3O15379 428 aa15.11■□□□□ 0.01
PDLIM4-202ENST00000379018 MT-ND5P03915 603 aa15.11■□□□□ 0.01
PDLIM4-202ENST00000379018 ZNF250P15622 560 aa15.11■□□□□ 0.01
PDLIM4-202ENST00000379018 H2AFXP16104 143 aaPredicted RBP15.11■□□□□ 0.01
PDLIM4-202ENST00000379018 AQP1P29972 269 aa15.11■□□□□ 0.01
PDLIM4-202ENST00000379018 MPP2Q14168 576 aa15.11■□□□□ 0.01
PDLIM4-202ENST00000379018 FAM91A1Q658Y4 838 aa15.11■□□□□ 0.01
PDLIM4-202ENST00000379018 NHLRC1Q6VVB1 395 aa15.11■□□□□ 0.01
PDLIM4-202ENST00000379018 SLC35D2Q76EJ3 337 aa15.11■□□□□ 0.01
PDLIM4-202ENST00000379018 SLC16A14Q7RTX9 510 aa15.11■□□□□ 0.01
PDLIM4-202ENST00000379018 RETREG3Q86VR2 466 aa15.11■□□□□ 0.01
PDLIM4-202ENST00000379018 OR5J2Q8NH18 312 aa15.11■□□□□ 0.01
PDLIM4-202ENST00000379018 ZNF519Q8TB69 540 aa15.11■□□□□ 0.01
PDLIM4-202ENST00000379018 ST7LQ8TDW4 575 aa15.11■□□□□ 0.01
PDLIM4-202ENST00000379018 TMEM54Q969K7 222 aa15.11■□□□□ 0.01
PDLIM4-202ENST00000379018 ELMOD3Q96FG2 381 aa15.11■□□□□ 0.01
PDLIM4-202ENST00000379018 TESQ9UGI8 421 aaKnown RBP15.11■□□□□ 0.01
PDLIM4-202ENST00000379018 RNF13O43567 381 aa15.1■□□□□ 0.01
PDLIM4-202ENST00000379018 ETS2P15036 469 aa15.1■□□□□ 0.01
PDLIM4-202ENST00000379018 ZFP36P26651 326 aaKnown RBP15.1■□□□□ 0.01
PDLIM4-202ENST00000379018 ZNF81P51508 661 aa15.1■□□□□ 0.01
PDLIM4-202ENST00000379018 CDH12P55289 794 aa15.1■□□□□ 0.01
PDLIM4-202ENST00000379018 UCP2P55851 309 aa15.1■□□□□ 0.01
PDLIM4-202ENST00000379018 HSF2Q03933 536 aa15.1■□□□□ 0.01
PDLIM4-202ENST00000379018 FADDQ13158 208 aa15.1■□□□□ 0.01
PDLIM4-202ENST00000379018 MMEL1Q495T6 779 aa15.1■□□□□ 0.01
PDLIM4-202ENST00000379018 HHATQ5VTY9 493 aa15.1■□□□□ 0.01
PDLIM4-202ENST00000379018 DHRS4L2Q6PKH6 230 aa15.1■□□□□ 0.01
PDLIM4-202ENST00000379018 KRT73Q86Y46 540 aa15.1■□□□□ 0.01
PDLIM4-202ENST00000379018 LRRC18Q8N456 261 aa15.1■□□□□ 0.01
PDLIM4-202ENST00000379018 RBM15BQ8NDT2 890 aaKnown RBP15.1■□□□□ 0.01
PDLIM4-202ENST00000379018 OR1J1Q8NGS3 322 aa15.1■□□□□ 0.01
PDLIM4-202ENST00000379018 OR6S1Q8NH40 331 aa15.1■□□□□ 0.01
PDLIM4-202ENST00000379018 ZNF566Q969W8 418 aa15.1■□□□□ 0.01
PDLIM4-202ENST00000379018 WFDC6Q9BQY6 131 aa15.1■□□□□ 0.01
PDLIM4-202ENST00000379018 PAIP1Q9H074 479 aaKnown RBP15.1■□□□□ 0.01
PDLIM4-202ENST00000379018 LRMDAQ9H2I8 198 aa15.1■□□□□ 0.01
PDLIM4-202ENST00000379018 ZIM2Q9NZV7 527 aa15.1■□□□□ 0.01
PDLIM4-202ENST00000379018 IQCMA0A1B0GVH7 501 aa15.09■□□□□ 0.01
PDLIM4-202ENST00000379018 KPNA4O00629 521 aaPredicted RBP15.09■□□□□ 0.01
PDLIM4-202ENST00000379018 DHHO43323 396 aa15.09■□□□□ 0.01
PDLIM4-202ENST00000379018 ATP8B1O43520 1251 aa15.09■□□□□ 0.01
PDLIM4-202ENST00000379018 ENTPD5O75356 428 aa15.09■□□□□ 0.01
PDLIM4-202ENST00000379018 GATA3P23771 443 aa15.09■□□□□ 0.01
PDLIM4-202ENST00000379018 APLNRP35414 380 aa15.09■□□□□ 0.01
PDLIM4-202ENST00000379018 RBMXP38159 391 aaKnown RBP15.09■□□□□ 0.01
PDLIM4-202ENST00000379018 CDK6Q00534 326 aa15.09■□□□□ 0.01
PDLIM4-202ENST00000379018 PLP2Q04941 152 aa15.09■□□□□ 0.01
PDLIM4-202ENST00000379018 BAMBIQ13145 260 aa15.09■□□□□ 0.01
PDLIM4-202ENST00000379018 SLC36A2Q495M3 483 aa15.09■□□□□ 0.01
PDLIM4-202ENST00000379018 LRFN4Q6PJG9 635 aa15.09■□□□□ 0.01
PDLIM4-202ENST00000379018 MSANTD1Q6ZTZ1 278 aa15.09■□□□□ 0.01
PDLIM4-202ENST00000379018 OR1J2Q8NGS2 313 aa15.09■□□□□ 0.01
PDLIM4-202ENST00000379018 OR6X1Q8NH79 312 aa15.09■□□□□ 0.01
PDLIM4-202ENST00000379018 AENQ8WTP8 325 aaKnown RBP15.09■□□□□ 0.01
PDLIM4-202ENST00000379018 GTF2H4Q92759 462 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms