RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 TRDV1A0A1B0GX56 115 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 CLN5O75503 358 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 LALBAP00709 142 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 EIF4EP06730 217 aaKnown RBP11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 GPR85P60893 370 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 SLC7A9P82251 487 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 MPEG1Q2M385 716 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 STEAP1BQ6NZ63 245 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 SLC51BQ86UW2 128 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 RBM45Q8IUH3 476 aaKnown RBP11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 ETFBKMTQ8IXQ9 262 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 TAAR8Q969N4 342 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 RASD2Q96D21 266 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 RBMXL1Q96E39 390 aaKnown RBP11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 HMX2A2RU54 273 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 TRABD2BA6NFA1 517 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 TRAPPC2LH3BP13 241 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 PAPLNO95428 1278 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 SPNP16150 400 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 SRMP19623 302 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 DLEU7Q6UYE1 221 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 NLRC3Q7RTR2 1065 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 LINC00346Q8IVM7 164 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 C1orf210Q8IVY1 113 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 CPNE4Q96A23 557 aaPredicted RBP11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 CHST8Q9H2A9 424 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 FAM96BQ9Y3D0 163 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 ZNF264O43296 627 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 TXNDC12O95881 172 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 ELK1P19419 428 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 NFYBP25208 207 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 SLC19A1P41440 591 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 CCSMST1Q4G0I0 132 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 AMDHD1Q96NU7 426 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 BLACEA4D250 179 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 FOLR1P15328 257 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 HCCSP53701 268 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 CLDN17P56750 224 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 PRDX1Q06830 199 aaKnown RBP11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 NEURL3Q96EH8 262 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 EXOSC3Q9NQT5 275 aaKnown RBP11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 MOKQ9UQ07 419 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 A0A087WUU8 490 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 ZNF44P15621 663 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 BCL6P41182 706 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 SSR4P51571 173 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 Q499Y3 187 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 HENMT1Q5T8I9 393 aaKnown RBP11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 ANKRD34AQ69YU3 496 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 GDPD3Q7L5L3 318 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 OR5D18Q8NGL1 313 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 SRPK3Q9UPE1 567 aa11.05□□□□□ -0.64
PCDHA9-201ENST00000378122 CCSO14618 274 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 SRSF5Q13243 272 aaKnown RBP11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 CRMP1Q14194 572 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 SLC36A2Q495M3 483 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 KDM8Q8N371 416 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 UBAC2Q8NBM4 344 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 H7C1Q1 480 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 ICAM2P13598 275 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 TAGLN2P37802 199 aaKnown RBP11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 C14orf79Q96F83 325 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 MS4A8Q9BY19 250 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 SLC23A2Q9UGH3 650 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 KIF25Q9UIL4 384 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 PURGQ9UJV8 347 aaKnown RBP11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 A3GALT2U3KPV4 340 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 AIPO00170 330 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 OR13C7P0DN81 318 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 SELENOIQ9C0D9 397 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 OR52A5Q9H2C5 316 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 SMCO4Q9NRQ5 59 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 PLSCR3Q9NRY6 295 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 CUTCQ9NTM9 273 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 PLEKHM1Q9Y4G2 1056 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 ETV7Q9Y603 341 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 RAB19A4D1S5 217 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 SERINC4A6NH21 518 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 HSD17B6O14756 317 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 EFSO43281 561 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 GPRIN2O60269 458 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 ISL1P61371 349 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 SNRPGP62308 76 aaKnown RBP11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 TLE4Q04727 773 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 ZNF74Q16587 644 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 MMP21Q8N119 569 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 LILRA3Q8N6C8 439 aaPredicted RBP11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 PLPP7Q8NBV4 271 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 ZMAT3Q9HA38 289 aaKnown RBP11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 SRFP11831 508 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 DEFA4P12838 97 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 F2RP25116 425 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 AADACL3Q5VUY0 350 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 CCDC71Q8IV32 467 aaPredicted RBP11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 OR5AS1Q8N127 324 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 ZNF740Q8NDX6 193 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 OR56B1Q8NGI3 324 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 OR6T1Q8NGN1 323 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 OR13C9Q8NGT0 318 aa11.04□□□□□ -0.64
PCDHA9-201ENST00000378122 GPR137BO60478 399 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms