RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, human

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMO7-204	ENST00000377499	ERMAP	Q96PL5	475 aa	Predicted RBP	10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	FUZ	Q9BT04	418 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	RTN4R	Q9BZR6	473 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	MEPE	Q9NQ76	525 aa	Predicted RBP	10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	NANS	Q9NR45	359 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	MYOT	Q9UBF9	498 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	GHRL	Q9UBU3	117 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	TNRC6B	Q9UPQ9	1833 aa	Known RBP	10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	CCDC187	A0A096LP49	1063 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	RPS10-NUDT3	A0A1W2PQS6	291 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	DBX1	A6NMT0	343 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	RIIAD1	A6NNX1	92 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	PRR33	A8MZF0	331 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	TCAP	O15273	167 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	F10	P00742	488 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	OPN1LW	P04000	364 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	TSPAN19	P0C672	248 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	SPP1	P10451	314 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	RPS5	P46782	204 aa	Known RBP	10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	CDH11	P55287	796 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	PLAUR	Q03405	335 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	PGGHG	Q32M88	737 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	STPG1	Q5TH74	334 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	CPO	Q8IVL8	374 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	HOXB13	Q92826	284 aa	Predicted RBP	10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	POLR2J2	Q9GZM3	115 aa	Known RBP	10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	UBQLN3	Q9H347	655 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	MED20	Q9H944	212 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	HHATL	Q9HCP6	504 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	KLHL1	Q9NR64	748 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	PSORS1C1	Q9UIG5	152 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	CLEC4A	Q9UMR7	237 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	SSR3	Q9UNL2	185 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	FARSA	Q9Y285	508 aa	Known RBP	10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	MUC6	Q6W4X9	2439 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	ITGA10	O75578	1167 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	DLST	P36957	453 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	SLC6A8	P48029	635 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	PLA2G7	Q13093	441 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	BAMBI	Q13145	260 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	CBFB	Q13951	182 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	GPR139	Q6DWJ6	353 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	FAM198B	Q6UWH4	519 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	NLRC3	Q7RTR2	1065 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	PRSS48	Q7RTY5	328 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	SIRT6	Q8N6T7	355 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	SUMF1	Q8NBK3	374 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	OR10G3	Q8NGC4	313 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	CT55	Q8WUE5	264 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	C3orf49	Q96BT1	292 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	YIPF6	Q96EC8	236 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	TBX5	Q99593	518 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	DUSP21	Q9H596	190 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	WDR54	Q9H977	334 aa		10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	ZNF223	Q9UK11	482 aa	Predicted RBP	10.6	□□□□□ -0.71
LMO7-204	ENST00000377499	DNASE2	O00115	360 aa	Predicted RBP	10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	LDLRAD4	O15165	306 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	TSPAN2	O60636	221 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	OR6A2	O95222	327 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	PNMT	P11086	282 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	GNAL	P38405	381 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	SKP2	Q13309	424 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	COL28A1	Q2UY09	1125 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	CLLU1	Q5K131	121 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	ACER2	Q5QJU3	275 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	DBX2	Q6ZNG2	339 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	OR4Q3	Q8NH05	313 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	PARD6A	Q9NPB6	346 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	TAS2R10	Q9NYW0	307 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	KLHL21	Q9UJP4	597 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	HS3ST3B1	Q9Y662	390 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	HEATR5A	Q86XA9	2040 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	C11orf98	E9PRG8	122 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	ZNF354A	O60765	605 aa	Predicted RBP	10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	SLC6A6	P31641	620 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	FCN2	Q15485	313 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	HYAL4	Q2M3T9	481 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	ALKAL2	Q6UX46	152 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	SSX6	Q7RTT6	188 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	TIPARP	Q7Z3E1	657 aa	Known RBP	10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	ATCAY	Q86WG3	371 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	LAX1	Q8IWV1	398 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	C19orf18	Q8NEA5	215 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	NFAM1	Q8NET5	270 aa	Predicted RBP	10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	OR4K13	Q8NH42	304 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	RNFT2	Q96EX2	444 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	ENKD1	Q9H0I2	346 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	EVA1A	Q9H8M9	152 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	ALPK2	Q86TB3	2170 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	ALG1L2	C9J202	215 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499		M0R233	179 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	TRAPPC2	P0DI81	140 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	TRAPPC2B	P0DI82	140 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	SLC1A3	P43003	542 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	PON3	Q15166	354 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	CSRP2	Q16527	193 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	CXXC5	Q7LFL8	322 aa	Known RBP	10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	ZSCAN1	Q8NBB4	408 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	OR4K17	Q8NGC6	315 aa		10.59	□□□□□ -0.71
LMO7-204	ENST00000377499	KLHDC3	Q9BQ90	382 aa		10.59	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms