RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 RCBTB1Q8NDN9 531 aa12.59□□□□□ -0.39
SF1-205ENST00000377394 PHYHIPQ92561 330 aa12.59□□□□□ -0.39
SF1-205ENST00000377394 PLEKHA1Q9HB21 404 aa12.59□□□□□ -0.39
SF1-205ENST00000377394 FAM60AQ9NP50 221 aa12.59□□□□□ -0.39
SF1-205ENST00000377394 POT1Q9NUX5 634 aa12.59□□□□□ -0.39
SF1-205ENST00000377394 MYEF2Q9P2K5 600 aaKnown RBP12.59□□□□□ -0.39
SF1-205ENST00000377394 DHCR7Q9UBM7 475 aaKnown RBP12.59□□□□□ -0.39
SF1-205ENST00000377394 A0A087WUJ7 227 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 TMEM272A0A1B0GTI8 110 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 ZNF879B4DU55 563 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 SULT1C2O00338 296 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 GPRIN2O60269 458 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 KRT33AO76009 404 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 RPL4P36578 427 aaKnown RBP12.58□□□□□ -0.4
SF1-205ENST00000377394 STARP49675 285 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 ART1P52961 327 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 NANOS3P60323 173 aaKnown RBP12.58□□□□□ -0.4
SF1-205ENST00000377394 ZNHIT3Q15649 155 aaPredicted RBP12.58□□□□□ -0.4
SF1-205ENST00000377394 MICBQ29980 383 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 BEX5Q5H9J7 111 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 OR6S1Q8NH40 331 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 RXFP4Q8TDU9 374 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 RGP1Q92546 391 aaPredicted RBP12.58□□□□□ -0.4
SF1-205ENST00000377394 SLC25A38Q96DW6 304 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 SPACA7Q96KW9 195 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 HSPA12BQ96MM6 686 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 F5P12259 2224 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 RANBP2P49792 3224 aaKnown RBP12.58□□□□□ -0.4
SF1-205ENST00000377394 MEX3AA1L020 520 aaKnown RBP12.58□□□□□ -0.4
SF1-205ENST00000377394 ACOD1A6NK06 481 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 IFITM5A6NNB3 132 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 ARPC3O15145 178 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 SMAD9O15198 467 aaKnown RBP12.58□□□□□ -0.4
SF1-205ENST00000377394 RLN1P04808 185 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 GP1BAP07359 652 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 DPP4P27487 766 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 MAGEB1P43366 347 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 GPR143P51810 404 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 SLC35D3Q5M8T2 416 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 ZNF684Q5T5D7 378 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 OR1S2Q8NGQ3 325 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 EDARADDQ8WWZ3 215 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 RASD2Q96D21 266 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 FBXO17Q96EF6 278 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 MRPL48Q96GC5 212 aaKnown RBP12.58□□□□□ -0.4
SF1-205ENST00000377394 SLC25A18Q9H1K4 315 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 FBXL3Q9UKT7 428 aa12.58□□□□□ -0.4
SF1-205ENST00000377394 TMEM218A2RU14 115 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 LINC01565O15544 149 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 EIF4E2O60573 245 aaKnown RBP12.57□□□□□ -0.4
SF1-205ENST00000377394 LUMP51884 338 aaPredicted RBP12.57□□□□□ -0.4
SF1-205ENST00000377394 SRSF3P84103 164 aaKnown RBP12.57□□□□□ -0.4
SF1-205ENST00000377394 LINC01590Q5TEZ4 76 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 C5orf46Q6UWT4 87 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 MOB3CQ70IA8 216 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 MUC20Q8N307 709 aaPredicted RBP12.57□□□□□ -0.4
SF1-205ENST00000377394 THAP6Q8TBB0 222 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 MRGPRX1Q96LB2 322 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 LMAN2LQ9H0V9 348 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 TCEAL2Q9H3H9 227 aaPredicted RBP12.57□□□□□ -0.4
SF1-205ENST00000377394 WSB2Q9NYS7 404 aaPredicted RBP12.57□□□□□ -0.4
SF1-205ENST00000377394 KLHL9Q9P2J3 617 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 LRIT1Q9P2V4 623 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 ZNF230Q9UIE0 474 aaPredicted RBP12.57□□□□□ -0.4
SF1-205ENST00000377394 A0A087WV48 116 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 FAM221BA6H8Z2 402 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 TTLL8A6PVC2 850 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 EFCAB7A8K855 629 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 SNRPGP15A8MWD9 76 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 PSMD9O00233 223 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 NPBWR1P48145 328 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 RPS4XP62701 263 aaKnown RBP12.57□□□□□ -0.4
SF1-205ENST00000377394 ILF3Q12906 894 aaKnown RBP eCLIP12.57□□□□□ -0.4
SF1-205ENST00000377394 ISXQ2M1V0 245 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 DEFB110Q30KQ9 67 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 C11orf88Q6PI97 169 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 ZNF761Q86XN6 746 aaPredicted RBP12.57□□□□□ -0.4
SF1-205ENST00000377394 OR2AK2Q8NG84 335 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 OR6K6Q8NGW6 343 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 MNTQ99583 582 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 CCDC3Q9BQI4 270 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 PTDSS2Q9BVG9 487 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 TMEM185BQ9H7F4 350 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 FKRPQ9H9S5 495 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 ZNF281Q9Y2X9 895 aa12.57□□□□□ -0.4
SF1-205ENST00000377394 A0A1B0GTQ1 180 aa12.56□□□□□ -0.4
SF1-205ENST00000377394 C4orf47A7E2U8 309 aa12.56□□□□□ -0.4
SF1-205ENST00000377394 SLC25A12O75746 678 aa12.56□□□□□ -0.4
SF1-205ENST00000377394 NDUFB6O95139 128 aa12.56□□□□□ -0.4
SF1-205ENST00000377394 ZFPL1O95159 310 aa12.56□□□□□ -0.4
SF1-205ENST00000377394 IFNA4P05014 189 aa12.56□□□□□ -0.4
SF1-205ENST00000377394 RD3LP0DJH9 198 aa12.56□□□□□ -0.4
SF1-205ENST00000377394 NFYBP25208 207 aa12.56□□□□□ -0.4
SF1-205ENST00000377394 FBXO46Q6PJ61 603 aaPredicted RBP12.56□□□□□ -0.4
SF1-205ENST00000377394 FCRLAQ7L513 359 aa12.56□□□□□ -0.4
SF1-205ENST00000377394 SVBPQ8N300 66 aa12.56□□□□□ -0.4
SF1-205ENST00000377394 OR4C3Q8NH37 302 aa12.56□□□□□ -0.4
SF1-205ENST00000377394 GPBAR1Q8TDU6 330 aa12.56□□□□□ -0.4
SF1-205ENST00000377394 C3orf49Q96BT1 292 aa12.56□□□□□ -0.4
SF1-205ENST00000377394 TMEM138Q9NPI0 162 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms