RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 GATSQ8NAP1 163 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 RCBTB1Q8NDN9 531 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 TMEM106AQ96A25 262 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 RERGQ96A58 199 aaPredicted RBP12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 SLC22A18Q96BI1 424 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 GAL3ST1Q99999 423 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 ACTR10Q9NZ32 417 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 HRH3Q9Y5N1 445 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 ETV7Q9Y603 341 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 SPACA6W5XKT8 324 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 SDK1Q7Z5N4 2213 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 LAMA1P25391 3075 aa12.82□□□□□ -0.36
CLCNKA-202ENST00000375692 RAD1O60671 282 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 KCNJ13O60928 360 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 CDC123O75794 336 aaPredicted RBP12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 LDOC1O95751 146 aaPredicted RBP12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 PLATP00750 562 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 TACSTD2P09758 323 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 CSRP1P21291 193 aaKnown RBP12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 S1PR1P21453 382 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 ACHEP22303 614 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 FNTBP49356 437 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 NAXDQ8IW45 347 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 SFTPA2Q8IWL1 248 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 SLC43A2Q8N370 569 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 FRMD1Q8N878 549 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 PATE1Q8WXA2 126 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 DNAJA3Q96EY1 480 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 ZFYVE21Q9BQ24 234 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 EVA1AQ9H8M9 152 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 POLE3Q9NRF9 147 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 ZNF337Q9Y3M9 751 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 GGT3PA6NGU5 568 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 TNFSF14O43557 240 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 RDH16O75452 317 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 CTAG2O75638 210 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 HPP00738 406 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 GABRG2P18507 467 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 FAUP35544 74 aaKnown RBP12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 MNDAP41218 407 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 GPR143P51810 404 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 KIR2DS3Q14952 304 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 ETFDHQ16134 617 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 NKAIN2Q5VXU1 208 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 SLC16A9Q7RTY1 509 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 ZNF550Q7Z398 422 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 HSD17B13Q7Z5P4 300 aaPredicted RBP12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 ZNF676Q8N7Q3 588 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 MOGAT1Q96PD6 335 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 EXO5Q9H790 373 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 SLC2A4RGQ9NR83 387 aa12.81□□□□□ -0.36
CLCNKA-202ENST00000375692 IGKV1D-42A0A075B6H8 117 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 TRBV5-5A0A0J9YX44 114 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 PLRG1O43660 514 aaKnown RBP12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 CSTAP01040 98 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 MST1P26927 711 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 GPR18Q14330 331 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 SLC6A19Q695T7 634 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 NPSR1Q6W5P4 371 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 JAZF1Q86VZ6 243 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 OR6N1Q8NGY5 312 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 PMM1Q92871 262 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 MARC2Q969Z3 335 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 MRI1Q9BV20 369 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 FOXQ1Q9C009 403 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 WDR76Q9H967 626 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 IFT46Q9NQC8 304 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 STEAP1Q9UHE8 339 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 OR4C45A6NMZ5 311 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 ABHD16AO95870 558 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 MPGP29372 298 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 LRRC69Q6ZNQ3 347 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 DPY19L4Q7Z388 723 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 ZNF227Q86WZ6 799 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 LSM14AQ8ND56 463 aaKnown RBP12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 OR2G2Q8NGZ5 317 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 C3orf49Q96BT1 292 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 SLC38A3Q99624 504 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 POFUT1Q9H488 388 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 LMAN1LQ9HAT1 526 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 APMAPQ9HDC9 416 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 GLS2Q9UI32 602 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 MMP17Q9ULZ9 603 aa12.8□□□□□ -0.36
CLCNKA-202ENST00000375692 PCP4L1A6NKN8 68 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 PRKACAP17612 351 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 MAPK3P27361 379 aaPredicted RBP12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 CTXN1P60606 82 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 GMFBP60983 142 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 PPP1CAP62136 330 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 RPS4XP62701 263 aaKnown RBP12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 RIPPLY1Q0D2K3 151 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 ERV3-1Q14264 604 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 ZNHIT3Q15649 155 aaPredicted RBP12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 ANKRD16Q6P6B7 361 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 LRRN1Q6UXK5 716 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 PRSS35Q8N3Z0 413 aa12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 BOLLQ8N9W6 283 aaKnown RBP12.79□□□□□ -0.36
CLCNKA-202ENST00000375692 OR9A4Q8NGU2 314 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 216.7 ms