RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 ZNF385DQ9H6B1 395 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 PRSS50Q9UI38 385 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 NAGKQ9UJ70 344 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 MST1RQ04912 1400 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 PRAMEF27A3QJZ7 478 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 PRAMEF25A6NGN4 478 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 CHEK1O14757 476 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 PRAMEF4O60810 478 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 SLC22A6Q4U2R8 563 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 PRAMEF9Q5VWM5 478 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 TMEM251Q8N6I4 163 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 STXBP6Q8NFX7 210 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 NID2Q14112 1375 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 FZD6O60353 706 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 FDXRP22570 491 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 ZNF789Q5FWF6 425 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 MS4A13Q5J8X5 152 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 FAM69BQ5VUD6 431 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 ARRDC1Q8N5I2 433 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 NUDCD2Q8WVJ2 157 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 RAB40CQ96S21 281 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 MRPS6P82932 125 aaKnown RBP6.12□□□□□ -1.43
UBR4-204ENST00000375254 TIGD5Q53EQ6 642 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 PRAMEF14Q5SWL7 426 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 TMEM107Q6UX40 140 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 GKN2Q86XP6 184 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 SDSLQ96GA7 329 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 NECTIN4Q96NY8 510 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 FBRSQ9HAH7 460 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 IFITM5A6NNB3 132 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 BMPR1AP36894 532 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 RGMBQ6NW40 437 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 OR4F5Q8NH21 305 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 OR4F4Q96R69 305 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 GAS2L1Q99501 681 aaPredicted RBP6.12□□□□□ -1.43
UBR4-204ENST00000375254 APODP05090 189 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 ZNF133P52736 654 aaPredicted RBP6.12□□□□□ -1.43
UBR4-204ENST00000375254 EMC4Q5J8M3 183 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 RGS7BPQ6MZT1 257 aaPredicted RBP6.12□□□□□ -1.43
UBR4-204ENST00000375254 ABHD15Q6UXT9 468 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 NIT1Q86X76 327 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 RIMKLAQ8IXN7 391 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 RXFP4Q8TDU9 374 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 RSRP1Q9BUV0 290 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 UBTD1Q9HAC8 227 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 SERPINE3A8MV23 424 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 SHC1P29353 583 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 ZNF628Q5EBL2 1059 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 PRICKLE2Q7Z3G6 844 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 FUBP3Q96I24 572 aaKnown RBP eCLIP6.12□□□□□ -1.43
UBR4-204ENST00000375254 AMDHD1Q96NU7 426 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 VTNP04004 478 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 SLC10A3P09131 477 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 FCER1GP30273 86 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 SULT1A1P50225 295 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 ZNRF4Q8WWF5 429 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 SFRP2Q96HF1 295 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 LHX3Q9UBR4 397 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 IER3IP1Q9Y5U9 82 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 ATP10AO60312 1499 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 TRBV11-1A0A0K0K1C0 115 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 CXCL11O14625 94 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 NDUFB6O95139 128 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 CD200P41217 278 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 RAD52P43351 418 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 PPOXP50336 477 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 HLA-DRB5Q30154 266 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 PRAMEF19Q5SWL8 479 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 ZNF385CQ66K41 422 aaPredicted RBP6.12□□□□□ -1.43
UBR4-204ENST00000375254 FAHD1Q6P587 224 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 DLK2Q6UY11 383 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 C6orf201Q7Z4U5 140 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 TMEM239Q8WW34 195 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 EID2BQ96D98 161 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 NMES1Q9C002 83 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 CSNK1G2P78368 415 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 CTSL3PQ5NE16 218 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 LIPIQ6XZB0 460 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 AMIGO3Q86WK7 504 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 POM121Q96HA1 1249 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 PRR11Q96HE9 360 aaPredicted RBP6.12□□□□□ -1.43
UBR4-204ENST00000375254 MTIF3Q9H2K0 278 aaKnown RBP6.12□□□□□ -1.43
UBR4-204ENST00000375254 NOX4Q9NPH5 578 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 PEF1Q9UBV8 284 aaKnown RBP6.12□□□□□ -1.43
UBR4-204ENST00000375254 TMEM150CB9EJG8 249 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 FCN1O00602 326 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 ASGR2P07307 311 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 CT45A6P0DMU7 189 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 CT45A5P0DMU8 189 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 CT45A7P0DMV0 189 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 PLGLB1Q02325 96 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 KHDC3LQ587J8 217 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 CT45A1Q5HYN5 189 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 OGFOD3Q6PK18 319 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 TECPR1Q7Z6L1 1165 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 VRK2Q86Y07 508 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 MKXQ8IYA7 352 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 CT45A3Q8NHU0 189 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 A4GALTQ9NPC4 353 aa6.12□□□□□ -1.43
UBR4-204ENST00000375254 POU3F2P20265 443 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms