RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 CLUP10909 449 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 C4BPBP20851 252 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 ITPKBP27987 946 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 TACR3P29371 465 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 INPP1P49441 399 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 SPCS3P61009 180 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 RAB4BP61018 213 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 ALG10Q5BKT4 473 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 GPR139Q6DWJ6 353 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 VASNQ6EMK4 673 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 ARL9Q6T311 187 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 CBLN3Q6UW01 205 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 APOOLQ6UXV4 268 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 TMEM91Q6ZNR0 172 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 KANSL1Q7Z3B3 1105 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 PRSS58Q8IYP2 241 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 PRR22Q8IZ63 422 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 ZNF441Q8N8Z8 693 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 TEX19Q8NA77 164 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 STT3BQ8TCJ2 826 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 SFT2D1Q8WV19 159 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 METTL21AQ8WXB1 218 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 ZMYND19Q96E35 227 aaPredicted RBP7.46□□□□□ -1.22
UBR4-202ENST00000375224 SDHCQ99643 169 aaPredicted RBP7.46□□□□□ -1.22
UBR4-202ENST00000375224 TIMP4Q99727 224 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 VRK1Q99986 396 aaPredicted RBP7.46□□□□□ -1.22
UBR4-202ENST00000375224 TCEAL7Q9BRU2 100 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 NMNAT2Q9BZQ4 307 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 SRRQ9GZT4 340 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 ESRP2Q9H6T0 727 aaKnown RBP7.46□□□□□ -1.22
UBR4-202ENST00000375224 MGAT4AQ9UM21 535 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 A0A0C4DFX4 3053 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 OIP5O43482 229 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 SLC25A12O75746 678 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 TXNDC12O95881 172 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 RLN2P04090 185 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 GYPBP06028 91 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 ASAH2BP0C7U1 165 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 MYF5P13349 255 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 SPI1P17947 270 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 ZNF117Q03924 483 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 ETFDHQ16134 617 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 GLYR1Q49A26 553 aaPredicted RBP7.46□□□□□ -1.22
UBR4-202ENST00000375224 UBE2J2Q8N2K1 259 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 SAP25Q8TEE9 199 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 SNX33Q8WV41 574 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 GFM1Q96RP9 751 aaKnown RBP7.46□□□□□ -1.22
UBR4-202ENST00000375224 DDOQ99489 341 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 MIXL1Q9H2W2 232 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 PILRBQ9UKJ0 227 aa7.46□□□□□ -1.22
UBR4-202ENST00000375224 TRAV36DV7A0A075B6V5 113 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 LRRN3E7EW58 273 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 MT-ATP6P00846 226 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 ABCD3P28288 659 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 SDHAP31040 664 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 ZNF81P51508 661 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 P2RX1P51575 399 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 OR12D2P58182 307 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 CTXN1P60606 82 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 FGL1Q08830 312 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 NKAIN1Q4KMZ8 207 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 DMKNQ6E0U4 476 aaPredicted RBP7.45□□□□□ -1.22
UBR4-202ENST00000375224 RPL22L1Q6P5R6 122 aaKnown RBP7.45□□□□□ -1.22
UBR4-202ENST00000375224 TRILQ7L0X0 811 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 ABHD4Q8TB40 342 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 NSMAFQ92636 917 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 POM121Q96HA1 1249 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 NMNAT3Q96T66 252 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 ATF6BQ99941 703 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 CRB3Q9BUF7 120 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 LRRN3Q9H3W5 708 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 KLHL1Q9NR64 748 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 COMMD3Q9UBI1 195 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 FBXL4Q9UKA2 621 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 ADAM18Q9Y3Q7 739 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 CACNA1EQ15878 2313 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 OGG1O15527 345 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 PRKNO60260 465 aaPredicted RBP7.45□□□□□ -1.22
UBR4-202ENST00000375224 KDM4BO94953 1096 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 NUDT14O95848 222 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 CYC1P08574 325 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 PYCR1P32322 319 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 AQP2P41181 271 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 TGM4P49221 684 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 POLR2HP52434 150 aaKnown RBP7.45□□□□□ -1.22
UBR4-202ENST00000375224 SLC26A5P58743 744 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 DCDP81605 110 aaKnown RBP7.45□□□□□ -1.22
UBR4-202ENST00000375224 EXOSC2Q13868 293 aaKnown RBP7.45□□□□□ -1.22
UBR4-202ENST00000375224 TATDN3Q17R31 274 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 HBMQ6B0K9 141 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 SLC25A25Q6KCM7 469 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 LEG1Q6P5S2 330 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 COX15Q7KZN9 410 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 MARCH3Q86UD3 253 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 MOSPD2Q8NHP6 518 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 PHYHIPQ92561 330 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 EDAQ92838 391 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 SEMA4CQ9C0C4 833 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 NRSN2Q9GZP1 204 aa7.45□□□□□ -1.22
UBR4-202ENST00000375224 VSX1Q9NZR4 365 aaPredicted RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms