RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 PURGQ9UJV8 347 aaKnown RBP13.56□□□□□ -0.24
NOTCH4-201ENST00000375023 LOXL2Q9Y4K0 774 aa13.56□□□□□ -0.24
NOTCH4-201ENST00000375023 A0A1W2PRD5 423 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 A0A1W2PRF3 423 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 A0A1W2PRM7 423 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 MAGEB4O15481 346 aaPredicted RBP13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 FURINP09958 794 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 SOX18P35713 384 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 CAMK2BQ13554 666 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 HACD4Q5VWC8 232 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 PIGQQ9BRB3 760 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 AMBRA1Q9C0C7 1298 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 SLA2Q9H6Q3 261 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 LPAR2Q9HBW0 351 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 URGCP-MRPS24S4R325 110 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 OR2W5A6NFC9 320 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 FOLR1P15328 257 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 GDNFP39905 211 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 ZFAND2BQ8WV99 257 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 FBXO17Q96EF6 278 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 TEX37Q96LM6 180 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 LRFN5Q96NI6 719 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 RGPD5Q99666 1765 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 NKX6-3A6NJ46 265 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 E9PI62 339 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 SLC35A1P78382 337 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 MSMO1Q15800 293 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 SMIM15Q7Z3B0 74 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 hCG_1809904A0A1W2PP81 198 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 A0A1W2PPE2 198 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 A0A1W2PR64 198 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 MEX3AA1L020 520 aaKnown RBP13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 ZFP92A6NM28 416 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 BCKDHBP21953 392 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 CCL4L1Q8NHW4 92 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 ASB17Q8WXJ9 295 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 SEMA4GQ9NTN9 838 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 OBP2AQ9NY56 170 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 SNX11Q9Y5W9 270 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 BLACEA4D250 179 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 ICAM2P13598 275 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 TAS2R46P59540 309 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 C17orf67Q0P5P2 114 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 ZNF74Q16587 644 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 TRMT12Q53H54 448 aaKnown RBP13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 LRRC28Q86X40 367 aaPredicted RBP13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 OR7G1Q8NGA0 311 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 SLC7A13Q8TCU3 470 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 POFUT1Q9H488 388 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 HRH3Q9Y5N1 445 aa13.55□□□□□ -0.24
NOTCH4-201ENST00000375023 BHLHE40O14503 412 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 DHRS4L1P0CG22 281 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 GIPRP48546 466 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 CYB561P49447 251 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 FOXK2Q01167 660 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 SLC16A11Q8NCK7 471 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 AMDHD1Q96NU7 426 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 PLK3Q9H4B4 646 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 FZR1Q9UM11 496 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 FBXO7Q9Y3I1 522 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 PAX6P26367 422 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 TSPAN31Q12999 210 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 MBOAT2Q6ZWT7 520 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 OR52I1Q8NGK6 324 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 RAB39BQ96DA2 213 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 EPHX3Q9H6B9 360 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 SPHK1Q9NYA1 384 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 RABL2AQ9UBK7 228 aaPredicted RBP13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 RABL2BQ9UNT1 228 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 ZNF814B7Z6K7 855 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 TGM6O95932 706 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 GPR176Q14439 515 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 ARL6IP1Q15041 203 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 PINX1Q96BK5 328 aaKnown RBP13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 ZFP57Q9NU63 452 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 USP3Q9Y6I4 520 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 SLC22A23A1A5C7 686 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 SLC31A2O15432 143 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 MLLT11Q13015 90 aaPredicted RBP13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 TBC1D28Q2M2D7 210 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 SLC37A2Q8TED4 501 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 CPPED1Q9BRF8 314 aaPredicted RBP13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 SMCO4Q9NRQ5 59 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 TRAV36DV7A0A075B6V5 113 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 ZNF732B4DXR9 585 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 SLC2A10O95528 541 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 ZNF728P0DKX0 622 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 TM4SF4P48230 202 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 GSCP56915 257 aaPredicted RBP13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 GDPD3Q7L5L3 318 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 PITHD1Q9GZP4 211 aaPredicted RBP13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 MKRN2Q9H000 416 aaKnown RBP13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 BOLA1Q9Y3E2 137 aa13.54□□□□□ -0.24
NOTCH4-201ENST00000375023 C7orf72A4D263 438 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 NCBP2LA6PVI3 153 aaKnown RBP13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 DEGS1O15121 323 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 CRYZL1O95825 349 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 OR8U8P0C7N1 319 aa13.53□□□□□ -0.24
NOTCH4-201ENST00000375023 TRA2BP62995 288 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms