RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 PAPOLBQ9NRJ5 636 aaKnown RBP13.2□□□□□ -0.3
HSPG2-201ENST00000374673 ZNF99A8MXY4 864 aaPredicted RBP13.19□□□□□ -0.3
HSPG2-201ENST00000374673 H3BN98 237 aa13.19□□□□□ -0.3
HSPG2-201ENST00000374673 SOCS2O14508 198 aa13.19□□□□□ -0.3
HSPG2-201ENST00000374673 ARHGEF9O43307 516 aa13.19□□□□□ -0.3
HSPG2-201ENST00000374673 DHHO43323 396 aa13.19□□□□□ -0.3
HSPG2-201ENST00000374673 QDPRP09417 244 aa13.19□□□□□ -0.3
HSPG2-201ENST00000374673 NOS3P29474 1203 aa13.19□□□□□ -0.3
HSPG2-201ENST00000374673 CD47Q08722 323 aa13.19□□□□□ -0.3
HSPG2-201ENST00000374673 SNTB1Q13884 538 aaKnown RBP13.19□□□□□ -0.3
HSPG2-201ENST00000374673 RCN1Q15293 331 aa13.19□□□□□ -0.3
HSPG2-201ENST00000374673 THEM4Q5T1C6 240 aa13.19□□□□□ -0.3
HSPG2-201ENST00000374673 C10orf128Q5T292 105 aa13.19□□□□□ -0.3
HSPG2-201ENST00000374673 C9orf135Q5VTT2 229 aa13.19□□□□□ -0.3
HSPG2-201ENST00000374673 LRFN4Q6PJG9 635 aa13.19□□□□□ -0.3
HSPG2-201ENST00000374673 MEX3BQ6ZN04 569 aaKnown RBP13.19□□□□□ -0.3
HSPG2-201ENST00000374673 ZNF627Q7L945 461 aa13.19□□□□□ -0.3
HSPG2-201ENST00000374673 SYT14Q8NB59 555 aa13.19□□□□□ -0.3
HSPG2-201ENST00000374673 OR2T33Q8NG76 320 aa13.19□□□□□ -0.3
HSPG2-201ENST00000374673 OR1K1Q8NGR3 316 aa13.19□□□□□ -0.3
HSPG2-201ENST00000374673 OR4Q3Q8NH05 313 aa13.19□□□□□ -0.3
HSPG2-201ENST00000374673 S100PBPQ96BU1 408 aa13.19□□□□□ -0.3
HSPG2-201ENST00000374673 ZNF837Q96EG3 531 aaPredicted RBP13.19□□□□□ -0.3
HSPG2-201ENST00000374673 RBP7Q96R05 134 aa13.19□□□□□ -0.3
HSPG2-201ENST00000374673 CIB1Q99828 191 aa13.19□□□□□ -0.3
HSPG2-201ENST00000374673 RBM4BQ9BQ04 359 aaKnown RBP13.19□□□□□ -0.3
HSPG2-201ENST00000374673 RBM4Q9BWF3 364 aaKnown RBP13.19□□□□□ -0.3
HSPG2-201ENST00000374673 KRT84Q9NSB2 600 aa13.19□□□□□ -0.3
HSPG2-201ENST00000374673 VSX1Q9NZR4 365 aaPredicted RBP13.19□□□□□ -0.3
HSPG2-201ENST00000374673 NDRG3Q9UGV2 375 aa13.19□□□□□ -0.3
HSPG2-201ENST00000374673 SLC22A23A1A5C7 686 aa13.18□□□□□ -0.3
HSPG2-201ENST00000374673 PRSS37A4D1T9 235 aa13.18□□□□□ -0.3
HSPG2-201ENST00000374673 SH3D21A4FU49 640 aa13.18□□□□□ -0.3
HSPG2-201ENST00000374673 OR5H1A6NKK0 313 aa13.18□□□□□ -0.3
HSPG2-201ENST00000374673 RRP9O43818 475 aaKnown RBP13.18□□□□□ -0.3
HSPG2-201ENST00000374673 BAG2O95816 211 aa13.18□□□□□ -0.3
HSPG2-201ENST00000374673 ANPEPP15144 967 aa13.18□□□□□ -0.3
HSPG2-201ENST00000374673 HIST1H1CP16403 213 aaKnown RBP13.18□□□□□ -0.3
HSPG2-201ENST00000374673 KIR2DL3P43628 341 aa13.18□□□□□ -0.3
HSPG2-201ENST00000374673 MYBPC1Q00872 1141 aa13.18□□□□□ -0.3
HSPG2-201ENST00000374673 TIMM23BQ5SRD1 257 aa13.18□□□□□ -0.3
HSPG2-201ENST00000374673 C1QTNF12Q5T7M4 302 aa13.18□□□□□ -0.3
HSPG2-201ENST00000374673 SLC25A47Q6Q0C1 308 aa13.18□□□□□ -0.3
HSPG2-201ENST00000374673 PTCHD4Q6ZW05 846 aa13.18□□□□□ -0.3
HSPG2-201ENST00000374673 SSX8Q7RTT4 187 aa13.18□□□□□ -0.3
HSPG2-201ENST00000374673 P2RY8Q86VZ1 359 aa13.18□□□□□ -0.3
HSPG2-201ENST00000374673 JAZF1Q86VZ6 243 aa13.18□□□□□ -0.3
HSPG2-201ENST00000374673 LINC01560Q8TB33 94 aa13.18□□□□□ -0.3
HSPG2-201ENST00000374673 DACH2Q96NX9 599 aa13.18□□□□□ -0.3
HSPG2-201ENST00000374673 WFIKKN1Q96NZ8 548 aa13.18□□□□□ -0.3
HSPG2-201ENST00000374673 FOXB1Q99853 325 aa13.18□□□□□ -0.3
HSPG2-201ENST00000374673 C9orf16Q9BUW7 83 aa13.18□□□□□ -0.3
HSPG2-201ENST00000374673 NELFAQ9H3P2 528 aa13.18□□□□□ -0.3
HSPG2-201ENST00000374673 USE1Q9NZ43 259 aa13.18□□□□□ -0.3
HSPG2-201ENST00000374673 ENOPH1Q9UHY7 261 aa13.18□□□□□ -0.3
HSPG2-201ENST00000374673 TMEFF2Q9UIK5 374 aaPredicted RBP13.18□□□□□ -0.3
HSPG2-201ENST00000374673 LRRK2Q5S007 2527 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 IGKV1D-43A0A0B4J1Z2 117 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 H7C1C5 153 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 EI24O14681 340 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 MITFO75030 526 aaPredicted RBP13.17□□□□□ -0.3
HSPG2-201ENST00000374673 SLC2A10O95528 541 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 COX6B1P14854 86 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 CDH2P19022 906 aaPredicted RBP13.17□□□□□ -0.3
HSPG2-201ENST00000374673 IGFBP5P24593 272 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 COL8A1P27658 744 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 GRK5P34947 590 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 CDKN2AP42771 156 aaKnown RBP13.17□□□□□ -0.3
HSPG2-201ENST00000374673 ZNF84P51523 738 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 CRISP1P54107 249 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 LCN6P62502 163 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 ESRRGP62508 458 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 ARF1P84077 181 aaKnown RBP13.17□□□□□ -0.3
HSPG2-201ENST00000374673 CDK5Q00535 292 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 FMODQ06828 376 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 DAG1Q14118 895 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 PGGHGQ32M88 737 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 TBRG1Q3YBR2 411 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 SLC27A4Q6P1M0 643 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 ANKRD16Q6P6B7 361 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 C22orf34Q6ZV56 151 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 OR4K13Q8NH42 304 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 FAM222BQ8WU58 562 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 HSD17B8Q92506 261 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 BCL2L2Q92843 193 aaPredicted RBP13.17□□□□□ -0.3
HSPG2-201ENST00000374673 MED18Q9BUE0 208 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 DCLRE1BQ9H816 532 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 SLC25A19Q9HC21 320 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 SLC17A5Q9NRA2 495 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 CRIM1Q9NZV1 1036 aa13.17□□□□□ -0.3
HSPG2-201ENST00000374673 RENP00797 406 aa13.16□□□□□ -0.3
HSPG2-201ENST00000374673 ALPLP05186 524 aa13.16□□□□□ -0.3
HSPG2-201ENST00000374673 THBDP07204 575 aa13.16□□□□□ -0.3
HSPG2-201ENST00000374673 EPXP11678 715 aa13.16□□□□□ -0.3
HSPG2-201ENST00000374673 HOXB1P14653 301 aaPredicted RBP13.16□□□□□ -0.3
HSPG2-201ENST00000374673 POU1F1P28069 291 aa13.16□□□□□ -0.3
HSPG2-201ENST00000374673 GIPRP48546 466 aa13.16□□□□□ -0.3
HSPG2-201ENST00000374673 ALDH3A2P51648 485 aa13.16□□□□□ -0.3
HSPG2-201ENST00000374673 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.16□□□□□ -0.3
HSPG2-201ENST00000374673 GINS1Q14691 196 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms