RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 NPAS1Q99742 590 aa11.96□□□□□ -0.49
NCDN-203ENST00000373253 AKAP7Q9P0M2 348 aaPredicted RBP11.96□□□□□ -0.49
NCDN-203ENST00000373253 FBXL3Q9UKT7 428 aa11.96□□□□□ -0.49
NCDN-203ENST00000373253 ZNF281Q9Y2X9 895 aa11.96□□□□□ -0.49
NCDN-203ENST00000373253 SLC19A2O60779 497 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 GLCEO94923 617 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 UCHL1P09936 223 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 IL17RDQ8NFM7 739 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 OR2AJ1Q8NGZ0 328 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 TXNDC15Q96J42 360 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 GNRHR2Q96P88 292 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 ZC4H2Q9NQZ6 224 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 TMEM269A0A1B0GVZ9 245 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 TEX46H3BTG2 121 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 SCO1O75880 301 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 JMJD7P0C870 316 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 GTF2F2P13984 249 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 RFX2P48378 723 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 RIDAP52758 137 aaKnown RBP11.96□□□□□ -0.5
NCDN-203ENST00000373253 CFHR1Q03591 330 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 NR0B2Q15466 257 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 C4orf46Q504U0 113 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 ZNF615Q8N8J6 731 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 NPEPL1Q8NDH3 523 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 OR14A16Q8NHC5 309 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 EXO5Q9H790 373 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 SERINC1Q9NRX5 453 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 CACNG2Q9Y698 323 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 PCNX3Q9H6A9 2034 aa11.96□□□□□ -0.5
NCDN-203ENST00000373253 P2RY10O00398 339 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 NUDT21O43809 227 aaKnown RBP11.95□□□□□ -0.5
NCDN-203ENST00000373253 ADRB1P08588 477 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 ATF4P18848 351 aaPredicted RBP11.95□□□□□ -0.5
NCDN-203ENST00000373253 HLA-DMAP28067 261 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 RPL22L1Q6P5R6 122 aaKnown RBP11.95□□□□□ -0.5
NCDN-203ENST00000373253 LYPD8Q6UX82 237 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 DCXRQ7Z4W1 244 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 NR2C2APQ86WQ0 139 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 LRRC28Q86X40 367 aaPredicted RBP11.95□□□□□ -0.5
NCDN-203ENST00000373253 OR13C3Q8NGS6 347 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 SLC25A44Q96H78 314 aaPredicted RBP11.95□□□□□ -0.5
NCDN-203ENST00000373253 AMELYQ99218 206 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 A0A1W2PR77 199 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 ARPC1BO15143 372 aaKnown RBP11.95□□□□□ -0.5
NCDN-203ENST00000373253 PLA2G10O15496 165 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 WDPCPO95876 746 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 SDHAP31040 664 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 PTH2RP49190 550 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 NANOS3P60323 173 aaKnown RBP11.95□□□□□ -0.5
NCDN-203ENST00000373253 GLO1Q04760 184 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 FUT7Q11130 342 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 FCN2Q15485 313 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 FAM69AQ5T7M9 428 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 SLC18B1Q6NT16 456 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 ZNF283Q8N7M2 679 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 TSPAN32Q96QS1 320 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 RBFOX1Q9NWB1 397 aaKnown RBP11.95□□□□□ -0.5
NCDN-203ENST00000373253 ZMIZ1Q9ULJ6 1067 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 AKR7A2O43488 359 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 TRIM3O75382 744 aaPredicted RBP11.95□□□□□ -0.5
NCDN-203ENST00000373253 IL33O95760 270 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 CTLA4P16410 223 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 SPINK2P20155 84 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 GDNFP39905 211 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 PLAURQ03405 335 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 LTBQ06643 244 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 FOXF1Q12946 379 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 CEBPEQ15744 281 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 SGCBQ16585 318 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.95□□□□□ -0.5
NCDN-203ENST00000373253 IFI44Q8TCB0 444 aa11.95□□□□□ -0.5
NCDN-203ENST00000373253 SF3B6Q9Y3B4 125 aaKnown RBP11.95□□□□□ -0.5
NCDN-203ENST00000373253 TRABD2BA6NFA1 517 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 PRR19A6NJB7 356 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 SULT2B1O00204 365 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 PDCD5O14737 125 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 PTP4A3O75365 173 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 ZNF43P17038 809 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 RSPO4Q2I0M5 234 aaPredicted RBP11.94□□□□□ -0.5
NCDN-203ENST00000373253 KCTD18Q6PI47 426 aaPredicted RBP11.94□□□□□ -0.5
NCDN-203ENST00000373253 CMTM4Q8IZR5 234 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 ACBD4Q8NC06 268 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 OR1N1Q8NGS0 311 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 OR52I2Q8NH67 350 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 SMIM19Q96E16 107 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 CCDC120Q96HB5 630 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 PTGES2Q9H7Z7 377 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 C12orf4Q9NQ89 552 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 ING4Q9UNL4 249 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 A3GALT2U3KPV4 340 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 MUC3AQ02505 3323 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 TRAV36DV7A0A075B6V5 113 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 FITM1A5D6W6 292 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 ARSBP15848 533 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 SLC2A5P22732 501 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 MTNR1BP49286 362 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 ZNF81P51508 661 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 ART1P52961 327 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 PCGF3Q3KNV8 242 aa11.94□□□□□ -0.5
NCDN-203ENST00000373253 OR8H3Q8N146 312 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms