RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 GLCEO94923 617 aa12.45□□□□□ -0.42
USP49-201ENST00000373006 F13BP05160 661 aa12.45□□□□□ -0.42
USP49-201ENST00000373006 CSN2P05814 226 aa12.45□□□□□ -0.42
USP49-201ENST00000373006 GAB4Q2WGN9 574 aa12.45□□□□□ -0.42
USP49-201ENST00000373006 LY6G6FQ5SQ64 297 aa12.45□□□□□ -0.42
USP49-201ENST00000373006 NKAIN2Q5VXU1 208 aa12.45□□□□□ -0.42
USP49-201ENST00000373006 DPY19L2P2Q6ZN68 376 aa12.45□□□□□ -0.42
USP49-201ENST00000373006 ZNF227Q86WZ6 799 aa12.45□□□□□ -0.42
USP49-201ENST00000373006 ZNF285Q96NJ3 590 aa12.45□□□□□ -0.42
USP49-201ENST00000373006 LMF1Q96S06 567 aa12.45□□□□□ -0.42
USP49-201ENST00000373006 STACQ99469 402 aa12.45□□□□□ -0.42
USP49-201ENST00000373006 ZNF471Q9BX82 626 aaPredicted RBP12.45□□□□□ -0.42
USP49-201ENST00000373006 PRMT8Q9NR22 394 aaPredicted RBP12.45□□□□□ -0.42
USP49-201ENST00000373006 STEAP1Q9UHE8 339 aa12.45□□□□□ -0.42
USP49-201ENST00000373006 SLC6A5Q9Y345 797 aa12.45□□□□□ -0.42
USP49-201ENST00000373006 ETV7Q9Y603 341 aa12.45□□□□□ -0.42
USP49-201ENST00000373006 TACSTD2P09758 323 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 OR4E1P0C645 316 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 PVRP15151 417 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 AKR1C3P42330 323 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 RBM34P42696 430 aaKnown RBP12.44□□□□□ -0.42
USP49-201ENST00000373006 POU3F4P49335 361 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 SGCGQ13326 291 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 STEAP1BQ6NZ63 245 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 MICU1Q9BPX6 476 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 TIMM29Q9BSF4 260 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 RASL12Q9NYN1 266 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 LOC100509620A0A075B734 347 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 HRKO00198 91 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 SLC31A1O15431 190 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 SIGLEC6O43699 453 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 FGF19O95750 216 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 PRSS3P35030 304 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 RAB13P51153 203 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 PSG6Q00889 435 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 MGAT2Q10469 447 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 CLINT1Q14677 625 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 C21orf62-AS1Q17RA5 79 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 C9orf152Q5JTZ5 239 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 ARHGAP40Q5TG30 622 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 ANKRD16Q6P6B7 361 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 PSRC1Q6PGN9 363 aaPredicted RBP12.44□□□□□ -0.42
USP49-201ENST00000373006 VITQ6UXI7 678 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 C12orf45Q8N5I9 185 aaPredicted RBP12.44□□□□□ -0.42
USP49-201ENST00000373006 STEAP2Q8NFT2 490 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 CCL4L1Q8NHW4 92 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 C15orf40Q8WUR7 153 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 FOXN4Q96NZ1 517 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 NMNAT2Q9BZQ4 307 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 ATG5Q9H1Y0 275 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 BARX1Q9HBU1 254 aaPredicted RBP12.44□□□□□ -0.42
USP49-201ENST00000373006 FGF22Q9HCT0 170 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 GTF2A1LQ9UNN4 478 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 OR5H14A6NHG9 310 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 EIF3GO75821 320 aaKnown RBP eCLIP12.44□□□□□ -0.42
USP49-201ENST00000373006 GPR75O95800 540 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 ITGA5P08648 1049 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 MGMTP16455 207 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 TDGQ13569 410 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 GUCA2BQ16661 112 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 C2orf76Q3KRA6 126 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 LIN54Q6MZP7 749 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 DNM1P46Q6ZS02 220 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 DPY19L4Q7Z388 723 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 GATSQ8NAP1 163 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 RPS4Y2Q8TD47 263 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 TRIM43Q96BQ3 446 aaPredicted RBP12.44□□□□□ -0.42
USP49-201ENST00000373006 MRI1Q9BV20 369 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 CTSFQ9UBX1 484 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 FBXL21Q9UKT6 434 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 FARSAQ9Y285 508 aaKnown RBP12.44□□□□□ -0.42
USP49-201ENST00000373006 SEC16AO15027 2179 aa12.44□□□□□ -0.42
USP49-201ENST00000373006 AKR7A3O95154 331 aa12.43□□□□□ -0.42
USP49-201ENST00000373006 CNR1P21554 472 aa12.43□□□□□ -0.42
USP49-201ENST00000373006 MAPK3P27361 379 aaPredicted RBP12.43□□□□□ -0.42
USP49-201ENST00000373006 PABPC1L2AQ5JQF8 200 aa12.43□□□□□ -0.42
USP49-201ENST00000373006 CORO6Q6QEF8 472 aa12.43□□□□□ -0.42
USP49-201ENST00000373006 LINC00114Q6XXX2 140 aa12.43□□□□□ -0.42
USP49-201ENST00000373006 LRRC69Q6ZNQ3 347 aa12.43□□□□□ -0.42
USP49-201ENST00000373006 JAZF1Q86VZ6 243 aa12.43□□□□□ -0.42
USP49-201ENST00000373006 OR6N2Q8NGY6 317 aa12.43□□□□□ -0.42
USP49-201ENST00000373006 PPP1R14AQ96A00 147 aa12.43□□□□□ -0.42
USP49-201ENST00000373006 WDR77Q9BQA1 342 aaPredicted RBP12.43□□□□□ -0.42
USP49-201ENST00000373006 PDCD10Q9BUL8 212 aa12.43□□□□□ -0.42
USP49-201ENST00000373006 WDR76Q9H967 626 aa12.43□□□□□ -0.42
USP49-201ENST00000373006 TAS2R8Q9NYW2 309 aa12.43□□□□□ -0.42
USP49-201ENST00000373006 DTX4Q9Y2E6 619 aa12.43□□□□□ -0.42
USP49-201ENST00000373006 COLEC10Q9Y6Z7 277 aa12.43□□□□□ -0.42
USP49-201ENST00000373006 EIF4E2O60573 245 aaKnown RBP12.43□□□□□ -0.42
USP49-201ENST00000373006 SMIM10L1P0DMW3 83 aa12.43□□□□□ -0.42
USP49-201ENST00000373006 HOXA1P49639 335 aaPredicted RBP12.43□□□□□ -0.42
USP49-201ENST00000373006 UBE2IP63279 158 aaKnown RBP12.43□□□□□ -0.42
USP49-201ENST00000373006 CST6Q15828 149 aa12.43□□□□□ -0.42
USP49-201ENST00000373006 SCGB2B2Q4G0G5 96 aa12.43□□□□□ -0.42
USP49-201ENST00000373006 SLC35D3Q5M8T2 416 aa12.43□□□□□ -0.42
USP49-201ENST00000373006 TMEM205Q6UW68 189 aa12.43□□□□□ -0.42
USP49-201ENST00000373006 ZNF627Q7L945 461 aa12.43□□□□□ -0.42
USP49-201ENST00000373006 CCDC36Q8IYA8 594 aa12.43□□□□□ -0.42
USP49-201ENST00000373006 SMIM10Q96HG1 83 aa12.43□□□□□ -0.42
USP49-201ENST00000373006 LAMP5Q9UJQ1 280 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms