RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 SFRP5Q5T4F7 317 aa14.37□□□□□ -0.11
TMEM53-203ENST00000372242 TMEM236Q5W0B7 351 aa14.37□□□□□ -0.11
TMEM53-203ENST00000372242 ZBTB49Q6ZSB9 765 aa14.37□□□□□ -0.11
TMEM53-203ENST00000372242 PARP8Q8N3A8 854 aa14.37□□□□□ -0.11
TMEM53-203ENST00000372242 OR2T33Q8NG76 320 aa14.37□□□□□ -0.11
TMEM53-203ENST00000372242 OR4K13Q8NH42 304 aa14.37□□□□□ -0.11
TMEM53-203ENST00000372242 LRRC46Q96FV0 321 aa14.37□□□□□ -0.11
TMEM53-203ENST00000372242 USP9YO00507 2555 aaPredicted RBP14.37□□□□□ -0.11
TMEM53-203ENST00000372242 SLC2A10O95528 541 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 COX5AP20674 150 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 MPGP29372 298 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 POLR2IP36954 125 aaKnown RBP14.36□□□□□ -0.11
TMEM53-203ENST00000372242 GIPRP48546 466 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 CRISP1P54107 249 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 GINS1Q14691 196 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 HIST3H3Q16695 136 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 FAM205BPQ63HN1 556 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 ACSM5Q6NUN0 579 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 LNX2Q8N448 690 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 ZNF433Q8N7K0 673 aaPredicted RBP14.36□□□□□ -0.11
TMEM53-203ENST00000372242 TAS2R16Q9NYV7 291 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 KLF2Q9Y5W3 355 aaPredicted RBP14.36□□□□□ -0.11
TMEM53-203ENST00000372242 SPTAN1Q13813 2472 aaKnown RBP14.36□□□□□ -0.11
TMEM53-203ENST00000372242 IGKV1D-43A0A0B4J1Z2 117 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 PRSS37A4D1T9 235 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 C16orf97H3BN30 126 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 RAD51DO75771 328 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 SEC14L2O76054 403 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 PEX2P28328 305 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 ALDH3A2P51648 485 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 SLC27A4Q6P1M0 643 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 ABHD12BQ7Z5M8 362 aaPredicted RBP14.36□□□□□ -0.11
TMEM53-203ENST00000372242 SDR9C7Q8NEX9 313 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 OR52E2Q8NGJ4 325 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 KISS1RQ969F8 398 aaPredicted RBP14.36□□□□□ -0.11
TMEM53-203ENST00000372242 MCHR2Q969V1 340 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 NMD3Q96D46 503 aaKnown RBP14.36□□□□□ -0.11
TMEM53-203ENST00000372242 PSMG3-AS1Q96PY0 264 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 NMNAT3Q96T66 252 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 B3GAT2Q9NPZ5 323 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 USE1Q9NZ43 259 aa14.36□□□□□ -0.11
TMEM53-203ENST00000372242 DOPEY2Q9Y3R5 2298 aa14.35□□□□□ -0.11
TMEM53-203ENST00000372242 CIB4A0PJX0 185 aa14.35□□□□□ -0.11
TMEM53-203ENST00000372242 RPL36A-HNRNPH2H7BZ11 118 aa14.35□□□□□ -0.11
TMEM53-203ENST00000372242 IDH3BO43837 385 aa14.35□□□□□ -0.11
TMEM53-203ENST00000372242 PSMB1P20618 241 aaKnown RBP14.35□□□□□ -0.11
TMEM53-203ENST00000372242 ARF1P84077 181 aaKnown RBP14.35□□□□□ -0.11
TMEM53-203ENST00000372242 PTGES3Q15185 160 aaKnown RBP14.35□□□□□ -0.11
TMEM53-203ENST00000372242 PGGHGQ32M88 737 aa14.35□□□□□ -0.11
TMEM53-203ENST00000372242 ZNF362Q5T0B9 420 aaPredicted RBP14.35□□□□□ -0.11
TMEM53-203ENST00000372242 LEG1Q6P5S2 330 aa14.35□□□□□ -0.11
TMEM53-203ENST00000372242 C22orf34Q6ZV56 151 aa14.35□□□□□ -0.11
TMEM53-203ENST00000372242 BHLHA15Q7RTS1 189 aaPredicted RBP14.35□□□□□ -0.11
TMEM53-203ENST00000372242 JAZF1Q86VZ6 243 aa14.35□□□□□ -0.11
TMEM53-203ENST00000372242 NSMAFQ92636 917 aa14.35□□□□□ -0.11
TMEM53-203ENST00000372242 HTRA1Q92743 480 aa14.35□□□□□ -0.11
TMEM53-203ENST00000372242 ALG12Q9BV10 488 aa14.35□□□□□ -0.11
TMEM53-203ENST00000372242 SYT4Q9H2B2 425 aa14.35□□□□□ -0.11
TMEM53-203ENST00000372242 RIBC2Q9H4K1 309 aa14.35□□□□□ -0.11
TMEM53-203ENST00000372242 RNPEPL1Q9HAU8 725 aa14.35□□□□□ -0.11
TMEM53-203ENST00000372242 SLC22A23A1A5C7 686 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 CENPBD1B2RD01 187 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 IL32P24001 234 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 ESRRGP62508 458 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 CDK5Q00535 292 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.34□□□□□ -0.11
TMEM53-203ENST00000372242 ZIK1Q3SY52 487 aaPredicted RBP14.34□□□□□ -0.11
TMEM53-203ENST00000372242 ADCK1Q86TW2 530 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 GALNT4Q8N4A0 578 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 CYB561A3Q8NBI2 242 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 LINC01560Q8TB33 94 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 S100PBPQ96BU1 408 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 TSSK2Q96PF2 358 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 RBP7Q96R05 134 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 ACTR6Q9GZN1 396 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 FN3KQ9H479 309 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 RERGLQ9H628 205 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 BAIAP2Q9UQB8 552 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 GPR52Q9Y2T5 361 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 ICE1Q9Y2F5 2266 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 A0A096LPE4 126 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 A0A1W2PPZ6 126 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 OR6C68A6NDL8 312 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 DHHO43323 396 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 TGFBR3Q03167 851 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 SLC34A1Q06495 639 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 NPRL3Q12980 569 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 ETFDHQ16134 617 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 GABRA6Q16445 453 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 THEM4Q5T1C6 240 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 HDHD5Q9BXW7 423 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 ORC6Q9Y5N6 252 aa14.34□□□□□ -0.11
TMEM53-203ENST00000372242 A0A1W2PR80 420 aa14.33□□□□□ -0.12
TMEM53-203ENST00000372242 ZNF99A8MXY4 864 aaPredicted RBP14.33□□□□□ -0.12
TMEM53-203ENST00000372242 DCTN6O00399 190 aa14.33□□□□□ -0.12
TMEM53-203ENST00000372242 CTLA4P16410 223 aa14.33□□□□□ -0.12
TMEM53-203ENST00000372242 COL8A1P27658 744 aa14.33□□□□□ -0.12
TMEM53-203ENST00000372242 STK11Q15831 433 aa14.33□□□□□ -0.12
TMEM53-203ENST00000372242 HIKESHIQ53FT3 197 aa14.33□□□□□ -0.12
TMEM53-203ENST00000372242 SLC25A47Q6Q0C1 308 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms