RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 PLEKHA1Q9HB21 404 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 TMEM27Q9HBJ8 222 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 NOX3Q9HBY0 568 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 MRPS18AQ9NVS2 196 aaKnown RBP8.07□□□□□ -1.12
ATG4A-203ENST00000372232 TIMM10BQ9Y5J6 103 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 CDH23Q9H251 3354 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 TRAV14DV4A0A0A6YYC5 116 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 A0A1W2PPH5 198 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 SLC5A10A0PJK1 596 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 IRGMA1A4Y4 181 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 DUXAA6NLW8 204 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 ZNF726A6NNF4 738 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 ZNF705EA8MWA4 302 aaPredicted RBP8.07□□□□□ -1.12
ATG4A-203ENST00000372232 IDSB3KWA1 339 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 E7EQ34 232 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 OR2F2O95006 317 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 NXPH2O95156 264 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 LRATO95237 230 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 THBS4P35443 961 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 MC3RP41968 323 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 SORDQ00796 357 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 SRSF11Q05519 484 aaKnown RBP8.07□□□□□ -1.12
ATG4A-203ENST00000372232 TMEM115Q12893 351 aaPredicted RBP8.07□□□□□ -1.12
ATG4A-203ENST00000372232 MTAPQ13126 283 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 OR2F1Q13607 317 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 GINS1Q14691 196 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 HEPACAMQ14CZ8 416 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 ISXQ2M1V0 245 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 C2orf68Q2NKX9 166 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 CCSMST1Q4G0I0 132 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 C14orf28Q4W4Y0 310 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 ETFRF1Q6IPR1 90 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 AGTRAPQ6RW13 159 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 LANCL3Q6ZV70 420 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 PARS2Q7L3T8 475 aaKnown RBP8.07□□□□□ -1.12
ATG4A-203ENST00000372232 WDR53Q7Z5U6 358 aaPredicted RBP8.07□□□□□ -1.12
ATG4A-203ENST00000372232 SPRED2Q7Z698 418 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 C5orf24Q7Z6I8 188 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 WFDC8Q8IUA0 241 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 NRSN1Q8IZ57 195 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 AQP11Q8NBQ7 271 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 OR9A1PQ8NGU1 263 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 OR52J3Q8NH60 311 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 PIGKQ92643 395 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 RNFT2Q96EX2 444 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 TMEM231Q9H6L2 316 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 CALML5Q9NZT1 146 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 NOTCH4Q99466 2003 aa8.07□□□□□ -1.12
ATG4A-203ENST00000372232 CHD9Q3L8U1 2897 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 ELOA3CA0A087WX78 387 aaPredicted RBP8.06□□□□□ -1.12
ATG4A-203ENST00000372232 UBE2QL1A1L167 161 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 TBC1D3BA6NDS4 549 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 ELOA3DA6NLF2 546 aaPredicted RBP8.06□□□□□ -1.12
ATG4A-203ENST00000372232 SOX15O60248 233 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 TSPAN2O60636 221 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 CYTIPO60759 359 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 CATP04040 527 aaKnown RBP8.06□□□□□ -1.12
ATG4A-203ENST00000372232 PRPS1L1P21108 318 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 BCL6P41182 706 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 KIR3DL1P43629 444 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 EGR3Q06889 387 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 TRA2AQ13595 282 aaKnown RBP eCLIP8.06□□□□□ -1.12
ATG4A-203ENST00000372232 ELOA3BQ3SY89 546 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 TCEAL5Q5H9L2 206 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 NKAIN2Q5VXU1 208 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 FBXW9Q5XUX1 488 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 OLFML2AQ68BL7 652 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 TBC1D3GQ6DHY5 549 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 ADAM5Q6NVV9 412 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 TMEM220Q6QAJ8 160 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 C20orf204Q6ZNR8 217 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 ZNF546Q86UE3 836 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 GID4Q8IVV7 300 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 CELF5Q8N6W0 485 aaKnown RBP8.06□□□□□ -1.12
ATG4A-203ENST00000372232 ZNF321PQ8N8H1 164 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 ELOA3Q8NG57 546 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 OR2AK2Q8NG84 335 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 OR8J2Q8NGG1 315 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 BADQ92934 168 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 GAL3ST4Q96RP7 486 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 WRAP53Q9BUR4 548 aaKnown RBP8.06□□□□□ -1.12
ATG4A-203ENST00000372232 TMED9Q9BVK6 235 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 TRMT61BQ9BVS5 477 aaKnown RBP8.06□□□□□ -1.12
ATG4A-203ENST00000372232 EBPLQ9BY08 206 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 PARD6GQ9BYG4 376 aaPredicted RBP8.06□□□□□ -1.12
ATG4A-203ENST00000372232 TMEM185BQ9H7F4 350 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 CNTD2Q9H8S5 307 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 RPS10P5Q9NQ39 176 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 THSD1Q9NS62 852 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 VPS29Q9UBQ0 182 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 CACFD1Q9UGQ2 172 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 CAMK2AQ9UQM7 478 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 RASD1Q9Y272 281 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 EXOSC1Q9Y3B2 195 aaKnown RBP8.06□□□□□ -1.12
ATG4A-203ENST00000372232 MTCL1Q9Y4B5 1905 aaKnown RBP8.06□□□□□ -1.12
ATG4A-203ENST00000372232 A0A0U1RQV5 110 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 OR2AT4A6NND4 320 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 H0YIV9 168 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 M0R143 59 aa8.06□□□□□ -1.12
ATG4A-203ENST00000372232 NDUFS8O00217 210 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms