RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 PFN3P60673 137 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 MZT1Q08AG7 82 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 MAVSQ7Z434 540 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 OR4F15Q8NGB8 312 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 CDX2Q99626 313 aaPredicted RBP12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 SLC5A10A0PJK1 596 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 MBTPS2O43462 519 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 HCRTR1O43613 425 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 IGHG1P01857 330 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 CXADRP78310 365 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 SORDQ00796 357 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 C1QTNF12Q5T7M4 302 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 HBMQ6B0K9 141 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 RPL22L1Q6P5R6 122 aaKnown RBP12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 PTRH1Q86Y79 214 aaKnown RBP12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 LYSMD2Q8IV50 215 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 DUSP19Q8WTR2 217 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 RBPMSQ93062 196 aaKnown RBP12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 ZNF286AQ9HBT8 521 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 EMC7Q9NPA0 242 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 PLEK2Q9NYT0 353 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 A0A1W2PS29 197 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 SUSD5O60279 629 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 TBX19O60806 448 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 NUDT3O95989 172 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 PTHP01270 115 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 SMIM18P0DKX4 95 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 ARAFP10398 606 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 NPPBP16860 134 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 FCER1GP30273 86 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 KCNAB1Q14722 419 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 TMEM176BQ3YBM2 270 aaPredicted RBP12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 CCSMST1Q4G0I0 132 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 TMEM244Q5VVB8 128 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 RTL6Q6ICC9 239 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 LINC00299Q6ZSB3 139 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 CELF2-AS1Q8N7Q2 184 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 CFHR5Q9BXR6 569 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 CDCP1Q9H5V8 836 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 GPR160Q9UJ42 338 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 EMC9Q9Y3B6 208 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 COL5A3P25940 1745 aaPredicted RBP12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 SLC16A6O15403 523 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 GASTP01350 101 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 PCBD1P61457 104 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 RPS25P62851 125 aaKnown RBP12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 RBMS2Q15434 407 aaKnown RBP12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 Q6ZS52 159 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 OR1S1Q8NH92 325 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 TM4SF18Q96CE8 201 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 THOC3Q96J01 351 aaKnown RBP12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 HRASLS5Q96KN8 279 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 TOLLIPQ9H0E2 274 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 PLEKHJ1Q9NW61 149 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 COL24A1Q17RW2 1714 aa12.28□□□□□ -0.44
RAPGEF1-201ENST00000372189 TAPBPO15533 448 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 UTS2O95399 124 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 TSPAN31Q12999 210 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 HNF4GQ14541 408 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 MRPL2Q5T653 305 aaKnown RBP12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 SYT6Q5T7P8 510 aaPredicted RBP12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 OR2G6Q5TZ20 316 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 ETFBKMTQ8IXQ9 262 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 OR4M1Q8NGD0 313 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 OR9K2Q8NGE7 335 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 LILRB1Q8NHL6 650 aaPredicted RBP12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 ZNF583Q96ND8 569 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 A3GALT2U3KPV4 340 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 METTL15A6NJ78 407 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 CNIH1O95406 144 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 SCGB1C2P0DMR2 95 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 CD1CP29017 333 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 DDOSTP39656 456 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 GIPRP48546 466 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 CYB561P49447 251 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 LTB4RQ15722 352 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 ABHD17CQ6PCB6 329 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 HIST2H3AQ71DI3 136 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 ZNF740Q8NDX6 193 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 OR5L1Q8NGL2 311 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 PIGQQ9BRB3 760 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 OR10A2Q9H208 303 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 OR51B6Q9H340 312 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 HRH4Q9H3N8 390 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 KLHL13Q9P2N7 655 aa12.27□□□□□ -0.44
RAPGEF1-201ENST00000372189 METTL12A8MUP2 240 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 HLA-AP01891 365 aaKnown RBP12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 C17orf67Q0P5P2 114 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 AGBL4Q5VU57 503 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 ZNF322Q6U7Q0 402 aaPredicted RBP12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 FUNDC1Q8IVP5 155 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 CDH26Q8IXH8 852 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 OR5D14Q8NGL3 314 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 ST8SIA4Q92187 359 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 MICU1Q9BPX6 476 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 HCAR1Q9BXC0 346 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 BET1LQ9NYM9 111 aa12.27□□□□□ -0.45
RAPGEF1-201ENST00000372189 LUZP4Q9P127 313 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms