RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 ACSM1Q08AH1 577 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 MYBPHQ13203 477 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 EXOSC7Q15024 291 aaKnown RBP13.39□□□□□ -0.27
LMO4-201ENST00000370542 GRK1Q15835 563 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 EIPR1Q53HC9 387 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 TEX261Q6UWH6 196 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 TMEM107Q6UX40 140 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 WDR53Q7Z5U6 358 aaPredicted RBP13.39□□□□□ -0.27
LMO4-201ENST00000370542 GALNT10Q86SR1 603 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 PRR22Q8IZ63 422 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 WDSUB1Q8N9V3 476 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 ATP6V1C2Q8NEY4 427 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 OR9Q2Q8NGE9 314 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 OR1J4Q8NGS1 313 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 VANGL1Q8TAA9 524 aaPredicted RBP13.39□□□□□ -0.27
LMO4-201ENST00000370542 GTPBP3Q969Y2 492 aaKnown RBP13.39□□□□□ -0.27
LMO4-201ENST00000370542 SLC35A4Q96G79 324 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 KCNN2Q9H2S1 579 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 PPA2Q9H2U2 334 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 SLC6A5Q9Y345 797 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 U3KQ87 197 aa13.39□□□□□ -0.27
LMO4-201ENST00000370542 FBN1P35555 2871 aaKnown RBP13.38□□□□□ -0.27
LMO4-201ENST00000370542 LINC00854A0A1B0GVQ3 168 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 CBR3O75828 277 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 TRAPPC6AO75865 159 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 GASTP01350 101 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 IL2RAP01589 272 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 HLA-DPB1P04440 258 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 ANXA4P09525 319 aaPredicted RBP13.38□□□□□ -0.27
LMO4-201ENST00000370542 CT45A8P0DMV1 189 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 CT45A9P0DMV2 189 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 FOSL1P15407 271 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 DAZAP2Q15038 168 aaPredicted RBP13.38□□□□□ -0.27
LMO4-201ENST00000370542 CT45A2Q5DJT8 189 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 WIPI1Q5MNZ9 446 aaPredicted RBP13.38□□□□□ -0.27
LMO4-201ENST00000370542 CNIH2Q6PI25 160 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 KCTD20Q7Z5Y7 419 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 TMEM200AQ86VY9 491 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 ADGRG3Q86Y34 549 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 SAMD14Q8IZD0 417 aaPredicted RBP13.38□□□□□ -0.27
LMO4-201ENST00000370542 OR4M1Q8NGD0 313 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 OR52R1Q8NGF1 315 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 FAM222BQ8WU58 562 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 VSTM2LQ96N03 204 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 SLC35A5Q9BS91 424 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 KATNB1Q9BVA0 655 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 PRR14Q9BWN1 585 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 TEX12Q9BXU0 123 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 ACTR6Q9GZN1 396 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 NARFLQ9H6Q4 476 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 MCUBQ9NWR8 336 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 TAS2R16Q9NYV7 291 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 REV1Q9UBZ9 1251 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 UBQLN2Q9UHD9 624 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 MRPS18CQ9Y3D5 142 aaKnown RBP13.38□□□□□ -0.27
LMO4-201ENST00000370542 NUBP2Q9Y5Y2 271 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 ZNF780BQ9Y6R6 833 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 COL6A5A8TX70 2615 aa13.38□□□□□ -0.27
LMO4-201ENST00000370542 GNB5O14775 395 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 CASKO14936 926 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 PLOD3O60568 738 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 TSPAN2O60636 221 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 H1F0P07305 194 aaKnown RBP13.37□□□□□ -0.27
LMO4-201ENST00000370542 ACP2P11117 423 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 BMP5P22003 454 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 GFRA1P56159 465 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 LTBQ06643 244 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 PLCXD2Q0VAA5 305 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 IL18Q14116 193 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 SEC23BQ15437 767 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 LTB4RQ15722 352 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 FLYWCH1Q4VC44 716 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 LIPKQ5VXJ0 399 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 FAM205BPQ63HN1 556 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 C22orf42Q6IC83 251 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 REEP3Q6NUK4 255 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 ANGPTL8Q6UXH0 198 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 BAIAP2L2Q6UXY1 529 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 PRIMA1Q86XR5 153 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 ZNF680Q8NEM1 530 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 OR52I1Q8NGK6 324 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 OR52J3Q8NH60 311 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 NFKBIDQ8NI38 313 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.37□□□□□ -0.27
LMO4-201ENST00000370542 C1GALT1C1Q96EU7 318 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 ZBED6CLQ96FA7 236 aaPredicted RBP13.37□□□□□ -0.27
LMO4-201ENST00000370542 SORCS2Q96PQ0 1159 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 FOXC2Q99958 501 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 HDHD5Q9BXW7 423 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 EBPLQ9BY08 206 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 POLR2J3Q9H1A7 115 aaKnown RBP13.37□□□□□ -0.27
LMO4-201ENST00000370542 METTL7AQ9H8H3 244 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 GALNT9Q9HCQ5 603 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 MED9Q9NWA0 146 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 DNAJB12Q9NXW2 375 aaKnown RBP13.37□□□□□ -0.27
LMO4-201ENST00000370542 CRIM1Q9NZV1 1036 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 NLKQ9UBE8 527 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 TESQ9UGI8 421 aaKnown RBP13.37□□□□□ -0.27
LMO4-201ENST00000370542 KIF25Q9UIL4 384 aa13.37□□□□□ -0.27
LMO4-201ENST00000370542 CBLCQ9ULV8 474 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms