RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 A0A1W2PRG6 482 aa17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 A0A1W2PRQ8 180 aa17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 IGHG1P01857 330 aa17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 IGHMP01871 453 aa17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 ACADSP16219 412 aa17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 IFNA8P32881 189 aa17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 IDH3GP51553 393 aaPredicted RBP17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 TNK1Q13470 666 aa17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 DGCR6Q14129 220 aa17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 NRN1LQ496H8 165 aa17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 C10orf128Q5T292 105 aa17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 TBPL2Q6SJ96 375 aa17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 TMPRSS11FQ6ZWK6 438 aa17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 MBOAT2Q6ZWT7 520 aa17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 SKA3Q8IX90 412 aa17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 IL17RDQ8NFM7 739 aa17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 OR4F15Q8NGB8 312 aa17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 FGFBP3Q8TAT2 258 aa17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 SLC7A13Q8TCU3 470 aa17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 MCHR2Q969V1 340 aa17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 ZNF347Q96SE7 839 aa17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 TXNIPQ9H3M7 391 aa17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 CA10Q9NS85 328 aa17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 TMEM38BQ9NVV0 291 aa17.8■□□□□ 0.44
SMNDC1-201ENST00000369592 ABCA1O95477 2261 aa17.79■□□□□ 0.44
SMNDC1-201ENST00000369592 PDE5AO76074 875 aa17.79■□□□□ 0.44
SMNDC1-201ENST00000369592 QDPRP09417 244 aa17.79■□□□□ 0.44
SMNDC1-201ENST00000369592 ZNF35P13682 527 aa17.79■□□□□ 0.44
SMNDC1-201ENST00000369592 ZNF26P17031 533 aaPredicted RBP17.79■□□□□ 0.44
SMNDC1-201ENST00000369592 DAP3P51398 398 aaKnown RBP17.79■□□□□ 0.44
SMNDC1-201ENST00000369592 VLDLRP98155 873 aa17.79■□□□□ 0.44
SMNDC1-201ENST00000369592 TAF11Q15544 211 aa17.79■□□□□ 0.44
SMNDC1-201ENST00000369592 ADIPOQQ15848 244 aa17.79■□□□□ 0.44
SMNDC1-201ENST00000369592 CLEC12BQ2HXU8 276 aa17.79■□□□□ 0.44
SMNDC1-201ENST00000369592 ANKDD1AQ495B1 522 aa17.79■□□□□ 0.44
SMNDC1-201ENST00000369592 SPATS1Q496A3 300 aa17.79■□□□□ 0.44
SMNDC1-201ENST00000369592 SAMD4BQ5PRF9 694 aaKnown RBP17.79■□□□□ 0.44
SMNDC1-201ENST00000369592 SLC22A24Q8N4F4 322 aa17.79■□□□□ 0.44
SMNDC1-201ENST00000369592 NOXO1Q8NFA2 376 aa17.79■□□□□ 0.44
SMNDC1-201ENST00000369592 HDAC2Q92769 488 aaKnown RBP17.79■□□□□ 0.44
SMNDC1-201ENST00000369592 KCNK17Q96T54 332 aa17.79■□□□□ 0.44
SMNDC1-201ENST00000369592 CDRT15Q96T59 188 aa17.79■□□□□ 0.44
SMNDC1-201ENST00000369592 REPIN1Q9BWE0 567 aaKnown RBP17.79■□□□□ 0.44
SMNDC1-201ENST00000369592 ZNF442Q9H7R0 627 aa17.79■□□□□ 0.44
SMNDC1-201ENST00000369592 SAMD4AQ9UPU9 718 aaKnown RBP17.79■□□□□ 0.44
SMNDC1-201ENST00000369592 YLPM1P49750 1951 aaKnown RBP17.79■□□□□ 0.44
SMNDC1-201ENST00000369592 CDC42EP2O14613 210 aa17.78■□□□□ 0.44
SMNDC1-201ENST00000369592 FAM107AO95990 144 aa17.78■□□□□ 0.44
SMNDC1-201ENST00000369592 RHCEP18577 417 aa17.78■□□□□ 0.44
SMNDC1-201ENST00000369592 ACVR1BP36896 505 aa17.78■□□□□ 0.44
SMNDC1-201ENST00000369592 SLC9A3P48764 834 aa17.78■□□□□ 0.44
SMNDC1-201ENST00000369592 EFNB3Q15768 340 aa17.78■□□□□ 0.44
SMNDC1-201ENST00000369592 GSG1Q2KHT4 349 aa17.78■□□□□ 0.44
SMNDC1-201ENST00000369592 ALG10Q5BKT4 473 aa17.78■□□□□ 0.44
SMNDC1-201ENST00000369592 HDDC2Q7Z4H3 204 aa17.78■□□□□ 0.44
SMNDC1-201ENST00000369592 MEX3DQ86XN8 651 aaKnown RBP17.78■□□□□ 0.44
SMNDC1-201ENST00000369592 ZNF584Q8IVC4 421 aa17.78■□□□□ 0.44
SMNDC1-201ENST00000369592 TNFRSF13CQ96RJ3 184 aa17.78■□□□□ 0.44
SMNDC1-201ENST00000369592 BARX1Q9HBU1 254 aaPredicted RBP17.78■□□□□ 0.44
SMNDC1-201ENST00000369592 UGT2A1Q9Y4X1 527 aa17.78■□□□□ 0.44
SMNDC1-201ENST00000369592 IGKV1D-43A0A0B4J1Z2 117 aa17.77■□□□□ 0.44
SMNDC1-201ENST00000369592 LIMS1P48059 325 aa17.77■□□□□ 0.44
SMNDC1-201ENST00000369592 PODNL1Q6PEZ8 512 aa17.77■□□□□ 0.44
SMNDC1-201ENST00000369592 ZNF730Q6ZMV8 503 aa17.77■□□□□ 0.44
SMNDC1-201ENST00000369592 PIP4P2Q8N4L2 257 aa17.77■□□□□ 0.44
SMNDC1-201ENST00000369592 ZNF519Q8TB69 540 aa17.77■□□□□ 0.44
SMNDC1-201ENST00000369592 NANOS1Q8WY41 292 aaKnown RBP17.77■□□□□ 0.44
SMNDC1-201ENST00000369592 MS4A3Q96HJ5 214 aa17.77■□□□□ 0.44
SMNDC1-201ENST00000369592 SMURF2Q9HAU4 748 aa17.77■□□□□ 0.44
SMNDC1-201ENST00000369592 STX18Q9P2W9 335 aaKnown RBP17.77■□□□□ 0.44
SMNDC1-201ENST00000369592 MAGEL2Q9UJ55 1249 aa17.77■□□□□ 0.44
SMNDC1-201ENST00000369592 TRAV27A0A087WT01 109 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 A0A096LNT2 108 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 TMEM129A0AVI4 362 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 EFCAB9A8MZ26 197 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 ARPC2O15144 300 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 PTP4A3O75365 173 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 UBL3O95164 117 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 LY6G6DO95868 133 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 H1F0P07305 194 aaKnown RBP17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 OR8G3PP0DMU2 310 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 T-ENOLP0DO92 83 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 CD79AP11912 226 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 TCN1P20061 433 aaPredicted RBP17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 MSX2P35548 267 aaPredicted RBP17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 SERPINF1P36955 418 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 GIPRP48546 466 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 CLRN1P58418 232 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 RPL27P61353 136 aaKnown RBP17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 RAB1AP62820 205 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 PIGFQ07326 219 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 KRTAP1-1Q07627 177 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 NPRL3Q12980 569 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 SLC25A47Q6Q0C1 308 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 CYP4Z1Q86W10 505 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 DEFB107AQ8IZN7 70 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 SYT14Q8NB59 555 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 OR10H5Q8NGA6 315 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 OR13C2Q8NGS9 318 aa17.76■□□□□ 0.43
SMNDC1-201ENST00000369592 OR51A7Q8NH64 312 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms