RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 RCE1Q9Y256 329 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 ZNF835Q9Y2P0 537 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 FREM1Q5H8C1 2179 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 SH3D21A4FU49 640 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 PTGES3LE9PB15 166 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 CTLA4P16410 223 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 EDNRAP25101 427 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 PYCR1P32322 319 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 CSNK1A1P48729 337 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 TEKQ02763 1124 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 ETFDHQ16134 617 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 C1orf185Q5T7R7 199 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 SEM1Q6ZVN7 128 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 GID4Q8IVV7 300 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 NOXO1Q8NFA2 376 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 PROKR2Q8NFJ6 384 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 OR6K6Q8NGW6 343 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 RFKQ969G6 155 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 SNX18Q96RF0 628 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 TEAD3Q99594 435 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 TM9SF2Q99805 663 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 ALG12Q9BV10 488 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 GP6Q9HCN6 339 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 PARPBPQ9NWS1 579 aa9.7□□□□□ -0.86
BRCC3-204ENST00000369462 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.7□□□□□ -0.86
BRCC3-204ENST00000369462 IGKV1D-43A0A0B4J1Z2 117 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 SNTNA6NMZ2 147 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 M0R3G1 203 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 FAM20BO75063 409 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 SLC43A1O75387 559 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 IGHV3-9P01782 118 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 HOXD4P09016 255 aaPredicted RBP9.69□□□□□ -0.86
BRCC3-204ENST00000369462 AGTR1P30556 359 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 SLC25A1P53007 311 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 CXCR4P61073 352 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 LRFN4Q6PJG9 635 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 MEPCEQ7L2J0 689 aaKnown RBP9.69□□□□□ -0.86
BRCC3-204ENST00000369462 NUFIP2Q7Z417 695 aaKnown RBP9.69□□□□□ -0.86
BRCC3-204ENST00000369462 ST6GALNAC3Q8NDV1 305 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 OR2T4Q8NH00 348 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 TMEM45BQ96B21 275 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 FOXN4Q96NZ1 517 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 NR1H4Q96RI1 486 aaPredicted RBP9.69□□□□□ -0.86
BRCC3-204ENST00000369462 C12orf49Q9H741 205 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 GLRX2Q9NS18 164 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 GLTPQ9NZD2 209 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 B9D1Q9UPM9 204 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 MYRFQ9Y2G1 1151 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 PCNX1Q96RV3 2341 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 DOCK7Q96N67 2140 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 MBD3L4A6NDZ8 208 aaPredicted RBP9.69□□□□□ -0.86
BRCC3-204ENST00000369462 MBD3L3A6NE82 208 aaPredicted RBP9.69□□□□□ -0.86
BRCC3-204ENST00000369462 MBD3L5A6NJ08 208 aaPredicted RBP9.69□□□□□ -0.86
BRCC3-204ENST00000369462 AHCYL1O43865 530 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 TOXO94900 526 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 QDPRP09417 244 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 CCDC159P0C7I6 412 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 SLC2A5P22732 501 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 CRHBPP24387 322 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 CRABP1P29762 137 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 MTNR1AP48039 350 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 SIRPAP78324 504 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 ZNF91Q05481 1191 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 HIST3H3Q16695 136 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 THEM4Q5T1C6 240 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 OR2A2Q6IF42 318 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 FAM214BQ7L5A3 538 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 CNEP1R1Q8N9A8 125 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 ZNF540Q8NDQ6 660 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 MBD3L2Q8NHZ7 208 aaPredicted RBP9.69□□□□□ -0.86
BRCC3-204ENST00000369462 NSMAFQ92636 917 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 MCHR2Q969V1 340 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 ZMYND19Q96E35 227 aaPredicted RBP9.69□□□□□ -0.86
BRCC3-204ENST00000369462 SCN3BQ9NY72 215 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 FOXD3Q9UJU5 478 aaPredicted RBP9.69□□□□□ -0.86
BRCC3-204ENST00000369462 RPL36Q9Y3U8 105 aaKnown RBP9.69□□□□□ -0.86
BRCC3-204ENST00000369462 FKBP7Q9Y680 259 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 SLC22A31A6NKX4 558 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 SS18L1O75177 396 aaPredicted RBP9.69□□□□□ -0.86
BRCC3-204ENST00000369462 UPK3AO75631 287 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 APOL3O95236 402 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 EEF1B2P24534 225 aaKnown RBP9.69□□□□□ -0.86
BRCC3-204ENST00000369462 HTR1FP30939 366 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 CENPAP49450 140 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 CSNK2BP67870 215 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 FOXF2Q12947 444 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 RBM48Q5RL73 367 aaKnown RBP9.69□□□□□ -0.86
BRCC3-204ENST00000369462 PHYHD1Q5SRE7 291 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 LYPD4Q6UWN0 246 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 ZNF100Q8IYN0 542 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 SGCDQ92629 289 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 NMD3Q96D46 503 aaKnown RBP9.69□□□□□ -0.86
BRCC3-204ENST00000369462 BBC3Q96PG8 261 aaPredicted RBP9.69□□□□□ -0.86
BRCC3-204ENST00000369462 TTYH2Q9BSA4 534 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 PLCXD1Q9NUJ7 323 aa9.69□□□□□ -0.86
BRCC3-204ENST00000369462 PHF3Q92576 2039 aaKnown RBP9.68□□□□□ -0.86
BRCC3-204ENST00000369462 EIF4E1BA6NMX2 242 aaKnown RBP9.68□□□□□ -0.86
BRCC3-204ENST00000369462 TNFAIP8O95379 198 aa9.68□□□□□ -0.86
BRCC3-204ENST00000369462 GPANK1O95872 356 aa9.68□□□□□ -0.86
BRCC3-204ENST00000369462 IL2RAP01589 272 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms