RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 OR52I2Q8NH67 350 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 NANOS1Q8WY41 292 aaKnown RBP10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 RNF212BA8MTL3 300 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 EEF1A1P5Q5VTE0 462 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 DUSP18Q8NEJ0 188 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 TERB2Q8NHR7 220 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 LRRC46Q96FV0 321 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 ZNF649Q9BS31 505 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 RHNO1Q9BSD3 238 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 MCCC2Q9HCC0 563 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 S100A8P05109 93 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 ZP3P21754 424 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 PXNP49023 591 aaPredicted RBP10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 CLPPQ16740 277 aaPredicted RBP10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 SOHLH1Q5JUK2 328 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 SLC22A25Q6T423 547 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 PAQR6Q6TCH4 344 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 LILRA3Q8N6C8 439 aaPredicted RBP10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 DCBLD2Q96PD2 775 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 ARHGDIGQ99819 225 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 MACROD1Q9BQ69 325 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 ZNF286AQ9HBT8 521 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 KCND3Q9UK17 655 aa10.85□□□□□ -0.67
CDC42BPA-202ENST00000366764 A0A0A6YYD5 115 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 XRCC3O43542 346 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 SUSD5O60279 629 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 BAMBIQ13145 260 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 SPICQ8N5J4 248 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 COQ3Q9NZJ6 369 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 STK17BO94768 372 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 SLC26A5P58743 744 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 GRB2P62993 217 aaKnown RBP10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 MPPED2Q15777 294 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 RTN4RL1Q86UN2 441 aaPredicted RBP10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 CD163Q86VB7 1156 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 TEX19Q8NA77 164 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 RSC1A1Q92681 617 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 SEC22CQ9BRL7 303 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 KCNS2Q9ULS6 477 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 EIF4EP06730 217 aaKnown RBP10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 RBM45Q8IUH3 476 aaKnown RBP10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 FBLIM1Q8WUP2 373 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 STRADBQ9C0K7 418 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 CACNA1EQ15878 2313 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 KIAA2026Q5HYC2 2103 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 SDHAP31040 664 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 ZNF628Q5EBL2 1059 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 TMEM99Q8N816 258 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 WDSUB1Q8N9V3 476 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 C10orf90Q96M02 699 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 TLCD2A6NGC4 264 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 SSX5O60225 188 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 ZNF93P35789 620 aaPredicted RBP10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 ATP1B3P54709 279 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 OR51Q1Q8NH59 317 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 CHST2Q9Y4C5 530 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 UTS2O95399 124 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 MT-CO2P00403 227 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 P04436 131 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 RAC2P15153 192 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 UBE2MP61081 183 aaKnown RBP10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 GRINAQ7Z429 371 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 NKAIN4Q8IVV8 208 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 SLC25A43Q8WUT9 341 aaPredicted RBP10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 EDAQ92838 391 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 OR5B2Q96R09 309 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 CUTCQ9NTM9 273 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 KCNG2Q9UJ96 466 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 HS3ST3A1Q9Y663 406 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 HCRTR1O43613 425 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 JTBO76095 146 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 SLC35A1P78382 337 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 EIF2S3LQ2VIR3 472 aaKnown RBP10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 MED25Q71SY5 747 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 GFOD1Q9NXC2 390 aa10.84□□□□□ -0.67
CDC42BPA-202ENST00000366764 TRIM64A6NGJ6 449 aa10.83□□□□□ -0.67
CDC42BPA-202ENST00000366764 VSTM5A8MXK1 200 aa10.83□□□□□ -0.67
CDC42BPA-202ENST00000366764 NUPL2O15504 423 aaKnown RBP10.83□□□□□ -0.67
CDC42BPA-202ENST00000366764 SLC6A1P30531 599 aa10.83□□□□□ -0.67
CDC42BPA-202ENST00000366764 RPP30P78346 268 aaKnown RBP10.83□□□□□ -0.67
CDC42BPA-202ENST00000366764 DEFB110Q30KQ9 67 aa10.83□□□□□ -0.67
CDC42BPA-202ENST00000366764 ANKRD33Q7Z3H0 272 aa10.83□□□□□ -0.67
CDC42BPA-202ENST00000366764 LILRB2Q8N423 598 aa10.83□□□□□ -0.67
CDC42BPA-202ENST00000366764 C12orf76Q8N812 135 aaPredicted RBP10.83□□□□□ -0.67
CDC42BPA-202ENST00000366764 PFN4Q8NHR9 129 aa10.83□□□□□ -0.67
CDC42BPA-202ENST00000366764 TOMM40LQ969M1 308 aa10.83□□□□□ -0.67
CDC42BPA-202ENST00000366764 ST6GALNAC5Q9BVH7 336 aa10.83□□□□□ -0.67
CDC42BPA-202ENST00000366764 EXOSC3Q9NQT5 275 aaKnown RBP10.83□□□□□ -0.67
CDC42BPA-202ENST00000366764 OR5H14A6NHG9 310 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 PIP5K1CO60331 668 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 ZNF16P17020 682 aaPredicted RBP10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 PTGER1P34995 402 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 EFNA3P52797 238 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 SELENOVP59797 346 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 HBG1P69891 147 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 HBG2P69892 147 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 C17orf67Q0P5P2 114 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 OR7A5Q15622 319 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 TOR2AQ5JU69 321 aa10.83□□□□□ -0.68
CDC42BPA-202ENST00000366764 APH1BQ8WW43 257 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms