RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 RAB1BQ9H0U4 201 aa10.81□□□□□ -0.68
MRPL55-209ENST00000366735 SLC38A1Q9H2H9 487 aa10.81□□□□□ -0.68
MRPL55-209ENST00000366735 CA10Q9NS85 328 aa10.81□□□□□ -0.68
MRPL55-209ENST00000366735 ARPC4-TTLL3A0A0A6YYG9 625 aa10.8□□□□□ -0.68
MRPL55-209ENST00000366735 LIPT2A6NK58 231 aa10.8□□□□□ -0.68
MRPL55-209ENST00000366735 CLDN24A6NM45 220 aa10.8□□□□□ -0.68
MRPL55-209ENST00000366735 ACADSP16219 412 aa10.8□□□□□ -0.68
MRPL55-209ENST00000366735 ITGA2P17301 1181 aa10.8□□□□□ -0.68
MRPL55-209ENST00000366735 RPS4Y1P22090 263 aaKnown RBP10.8□□□□□ -0.68
MRPL55-209ENST00000366735 NTF4P34130 210 aa10.8□□□□□ -0.68
MRPL55-209ENST00000366735 TAF11Q15544 211 aa10.8□□□□□ -0.68
MRPL55-209ENST00000366735 TBRG1Q3YBR2 411 aa10.8□□□□□ -0.68
MRPL55-209ENST00000366735 HIKESHIQ53FT3 197 aa10.8□□□□□ -0.68
MRPL55-209ENST00000366735 RPS26P11Q5JNZ5 115 aaPredicted RBP10.8□□□□□ -0.68
MRPL55-209ENST00000366735 FAM120AOSQ5T036 256 aa10.8□□□□□ -0.68
MRPL55-209ENST00000366735 WBP2NLQ6ICG8 309 aa10.8□□□□□ -0.68
MRPL55-209ENST00000366735 OR2T5Q6IEZ7 315 aa10.8□□□□□ -0.68
MRPL55-209ENST00000366735 TSEN54Q7Z6J9 526 aaKnown RBP10.8□□□□□ -0.68
MRPL55-209ENST00000366735 HMGN2P46Q86SG4 172 aa10.8□□□□□ -0.68
MRPL55-209ENST00000366735 EPHX4Q8IUS5 362 aa10.8□□□□□ -0.68
MRPL55-209ENST00000366735 ICA1LQ8NDH6 482 aa10.8□□□□□ -0.68
MRPL55-209ENST00000366735 OR4F15Q8NGB8 312 aa10.8□□□□□ -0.68
MRPL55-209ENST00000366735 OR1K1Q8NGR3 316 aa10.8□□□□□ -0.68
MRPL55-209ENST00000366735 OR2T29Q8NH02 315 aa10.8□□□□□ -0.68
MRPL55-209ENST00000366735 MAGEE2Q8TD90 523 aaPredicted RBP10.8□□□□□ -0.68
MRPL55-209ENST00000366735 ALKBH3Q96Q83 286 aaPredicted RBP10.8□□□□□ -0.68
MRPL55-209ENST00000366735 ZNF347Q96SE7 839 aa10.8□□□□□ -0.68
MRPL55-209ENST00000366735 CIB1Q99828 191 aa10.8□□□□□ -0.68
MRPL55-209ENST00000366735 OAZ3Q9UMX2 235 aa10.8□□□□□ -0.68
MRPL55-209ENST00000366735 RASD1Q9Y272 281 aa10.8□□□□□ -0.68
MRPL55-209ENST00000366735 IGHV1-18A0A0C4DH31 117 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 SAC3D1A6NKF1 404 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 A8MVM7 634 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 AKAP8O43823 692 aaKnown RBP10.79□□□□□ -0.68
MRPL55-209ENST00000366735 LY6HO94772 140 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 AKR7A3O95154 331 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 PF4P02776 101 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 OPN1SWP03999 348 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 ZNF23P17027 643 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 PCMT1P22061 227 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 CHN2P52757 468 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 AQP4P55087 323 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 GK3PQ14409 553 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 LARS2Q15031 903 aaKnown RBP10.79□□□□□ -0.68
MRPL55-209ENST00000366735 EFNB3Q15768 340 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 DUSP7Q16829 419 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 NIPAL3Q6P499 406 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 CBR4Q8N4T8 237 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 CELF2-AS1Q8N7Q2 184 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 TMEM99Q8N816 258 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 GPR32P1Q8NGA4 272 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 NEU4Q8WWR8 484 aaPredicted RBP10.79□□□□□ -0.68
MRPL55-209ENST00000366735 ZG16BQ96DA0 208 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 MSI2Q96DH6 328 aaKnown RBP10.79□□□□□ -0.68
MRPL55-209ENST00000366735 ITPKCQ96DU7 683 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 NRBF2Q96F24 287 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 ZNF385AQ96PM9 386 aaKnown RBP10.79□□□□□ -0.68
MRPL55-209ENST00000366735 SLC29A1Q99808 456 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 ADAM19Q9H013 955 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 NDUFAF4Q9P032 175 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 LRCH1Q9Y2L9 728 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 ENPP4Q9Y6X5 453 aa10.79□□□□□ -0.68
MRPL55-209ENST00000366735 ZC3H12DA2A288 527 aaKnown RBP10.78□□□□□ -0.68
MRPL55-209ENST00000366735 SOCS2O14508 198 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 GNGT2O14610 69 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 FRS3O43559 492 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 AHSA1O95433 338 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 HPRP00739 348 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 TGFAP01135 160 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 OR4A8P0C604 315 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 PRKAR1BP31321 381 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 IDH3GP51553 393 aaPredicted RBP10.78□□□□□ -0.68
MRPL55-209ENST00000366735 NAAAQ02083 359 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 PLAURQ03405 335 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 RNF220Q5VTB9 566 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 C1orf140Q5VVS0 124 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 ANKRD16Q6P6B7 361 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 DHRS4L2Q6PKH6 230 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 VHLLQ6RSH7 139 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 ZDHHC13Q8IUH4 622 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 CADM2Q8N3J6 435 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 RFLNBQ8N5W9 214 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 ARIH2OSQ8N7S6 290 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 FAM169BQ8N8A8 192 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 SMYD1Q8NB12 490 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 NUP37Q8NFH4 326 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 OR52P1PQ8NH57 321 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 OR5K1Q8NHB7 308 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 HPS1Q92902 700 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 RSPO3Q9BXY4 272 aaPredicted RBP10.78□□□□□ -0.68
MRPL55-209ENST00000366735 LINC00470Q9BZP3 86 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 BPESC1Q9GZL8 116 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 GABARAPL1Q9H0R8 117 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 PLK3Q9H4B4 646 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 ZNF442Q9H7R0 627 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 DYNLRB1Q9NP97 96 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 USE1Q9NZ43 259 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 CRNNQ9UBG3 495 aaPredicted RBP10.78□□□□□ -0.68
MRPL55-209ENST00000366735 RAB26Q9ULW5 256 aa10.78□□□□□ -0.68
MRPL55-209ENST00000366735 IFT52Q9Y366 437 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms