RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 CDKN1BP46527 198 aa2.15□□□□□ -2.07
RNU4-28P-201ENST00000364739 RFX3P48380 749 aa2.15□□□□□ -2.07
RNU4-28P-201ENST00000364739 ATP1B3P54709 279 aa2.15□□□□□ -2.07
RNU4-28P-201ENST00000364739 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
RNU4-28P-201ENST00000364739 DHDDSQ86SQ9 333 aa2.15□□□□□ -2.07
RNU4-28P-201ENST00000364739 ZNF557Q8N988 423 aaPredicted RBP2.15□□□□□ -2.07
RNU4-28P-201ENST00000364739 OR2T3Q8NH03 318 aa2.15□□□□□ -2.07
RNU4-28P-201ENST00000364739 RNF139Q8WU17 664 aa2.15□□□□□ -2.07
RNU4-28P-201ENST00000364739 MTMR9Q96QG7 549 aa2.15□□□□□ -2.07
RNU4-28P-201ENST00000364739 ZNF607Q96SK3 696 aa2.15□□□□□ -2.07
RNU4-28P-201ENST00000364739 SORT1Q99523 831 aa2.15□□□□□ -2.07
RNU4-28P-201ENST00000364739 OSBPL10Q9BXB5 764 aa2.15□□□□□ -2.07
RNU4-28P-201ENST00000364739 WFDC1Q9HC57 220 aa2.15□□□□□ -2.07
RNU4-28P-201ENST00000364739 ZNF207O43670 478 aaKnown RBP2.14□□□□□ -2.07
RNU4-28P-201ENST00000364739 MGRN1O60291 552 aa2.14□□□□□ -2.07
RNU4-28P-201ENST00000364739 BCHEP06276 602 aa2.14□□□□□ -2.07
RNU4-28P-201ENST00000364739 CAPN1P07384 714 aa2.14□□□□□ -2.07
RNU4-28P-201ENST00000364739 GNAO1P09471 354 aa2.14□□□□□ -2.07
RNU4-28P-201ENST00000364739 IGHV1-8P0DP01 117 aa2.14□□□□□ -2.07
RNU4-28P-201ENST00000364739 AK4P27144 223 aaPredicted RBP2.14□□□□□ -2.07
RNU4-28P-201ENST00000364739 CDKN2BP42772 138 aa2.14□□□□□ -2.07
RNU4-28P-201ENST00000364739 CSNK1A1P48729 337 aa2.14□□□□□ -2.07
RNU4-28P-201ENST00000364739 RORCP51449 518 aa2.14□□□□□ -2.07
RNU4-28P-201ENST00000364739 GINS1Q14691 196 aa2.14□□□□□ -2.07
RNU4-28P-201ENST00000364739 DUX4L9Q6RFH8 374 aaPredicted RBP2.14□□□□□ -2.07
RNU4-28P-201ENST00000364739 THRSPQ92748 146 aa2.14□□□□□ -2.07
RNU4-28P-201ENST00000364739 EMG1Q92979 244 aaKnown RBP2.14□□□□□ -2.07
RNU4-28P-201ENST00000364739 OR8B4Q96RC9 309 aa2.14□□□□□ -2.07
RNU4-28P-201ENST00000364739 PPA2Q9H2U2 334 aa2.14□□□□□ -2.07
RNU4-28P-201ENST00000364739 LINC00597Q9H2U6 94 aa2.14□□□□□ -2.07
RNU4-28P-201ENST00000364739 RIBC2Q9H4K1 309 aa2.14□□□□□ -2.07
RNU4-28P-201ENST00000364739 TMEM14AQ9Y6G1 99 aa2.14□□□□□ -2.07
RNU4-28P-201ENST00000364739 IGLV3-12A0A075B6K2 115 aa2.13□□□□□ -2.07
RNU4-28P-201ENST00000364739 RAD51BO15315 384 aa2.13□□□□□ -2.07
RNU4-28P-201ENST00000364739 IGHV2-5P01817 119 aa2.13□□□□□ -2.07
RNU4-28P-201ENST00000364739 KRT8P05787 483 aa2.13□□□□□ -2.07
RNU4-28P-201ENST00000364739 POLR2MP0CAP2 368 aa2.13□□□□□ -2.07
RNU4-28P-201ENST00000364739 PSMA5P28066 241 aa2.13□□□□□ -2.07
RNU4-28P-201ENST00000364739 NAMPTP43490 491 aa2.13□□□□□ -2.07
RNU4-28P-201ENST00000364739 LOXL1Q08397 574 aaPredicted RBP2.13□□□□□ -2.07
RNU4-28P-201ENST00000364739 SNRNP35Q16560 246 aaKnown RBP2.13□□□□□ -2.07
RNU4-28P-201ENST00000364739 CEMP1Q6PRD7 247 aaPredicted RBP2.13□□□□□ -2.07
RNU4-28P-201ENST00000364739 ENPP6Q6UWR7 440 aa2.13□□□□□ -2.07
RNU4-28P-201ENST00000364739 CALHM3Q86XJ0 350 aa2.13□□□□□ -2.07
RNU4-28P-201ENST00000364739 ZNF547Q8IVP9 402 aa2.13□□□□□ -2.07
RNU4-28P-201ENST00000364739 LINC00304Q8N9R0 145 aa2.13□□□□□ -2.07
RNU4-28P-201ENST00000364739 OR5D13Q8NGL4 314 aa2.13□□□□□ -2.07
RNU4-28P-201ENST00000364739 TM4SF18Q96CE8 201 aa2.13□□□□□ -2.07
RNU4-28P-201ENST00000364739 C16orf45Q96MC5 204 aaPredicted RBP2.13□□□□□ -2.07
RNU4-28P-201ENST00000364739 GPATCH2LQ9NWQ4 482 aa2.13□□□□□ -2.07
RNU4-28P-201ENST00000364739 KIR2DS1A0A191URI9 304 aa2.12□□□□□ -2.07
RNU4-28P-201ENST00000364739 FCMRO60667 390 aa2.12□□□□□ -2.07
RNU4-28P-201ENST00000364739 PEX11AO75192 247 aa2.12□□□□□ -2.07
RNU4-28P-201ENST00000364739 OR7A10O76100 309 aa2.12□□□□□ -2.07
RNU4-28P-201ENST00000364739 UTS2O95399 124 aa2.12□□□□□ -2.07
RNU4-28P-201ENST00000364739 ATP5C1P36542 298 aaKnown RBP2.12□□□□□ -2.07
RNU4-28P-201ENST00000364739 SLC11A1P49279 550 aa2.12□□□□□ -2.07
RNU4-28P-201ENST00000364739 CDH4P55283 916 aa2.12□□□□□ -2.07
RNU4-28P-201ENST00000364739 KIR2DS1Q14954 304 aa2.12□□□□□ -2.07
RNU4-28P-201ENST00000364739 ZSCAN26Q16670 478 aa2.12□□□□□ -2.07
RNU4-28P-201ENST00000364739 DGUOKQ16854 277 aa2.12□□□□□ -2.07
RNU4-28P-201ENST00000364739 PRMT9Q6P2P2 845 aa2.12□□□□□ -2.07
RNU4-28P-201ENST00000364739 NECAP1Q8NC96 275 aa2.12□□□□□ -2.07
RNU4-28P-201ENST00000364739 OR2G2Q8NGZ5 317 aa2.12□□□□□ -2.07
RNU4-28P-201ENST00000364739 SCFD1Q8WVM8 642 aa2.12□□□□□ -2.07
RNU4-28P-201ENST00000364739 L3HYPDHQ96EM0 354 aa2.12□□□□□ -2.07
RNU4-28P-201ENST00000364739 PANX2Q96RD6 677 aa2.12□□□□□ -2.07
RNU4-28P-201ENST00000364739 MRPL37Q9BZE1 423 aaKnown RBP2.12□□□□□ -2.07
RNU4-28P-201ENST00000364739 RPF2Q9H7B2 306 aaKnown RBP2.12□□□□□ -2.07
RNU4-28P-201ENST00000364739 RMND5AQ9H871 391 aa2.12□□□□□ -2.07
RNU4-28P-201ENST00000364739 HMG20AQ9NP66 347 aa2.12□□□□□ -2.07
RNU4-28P-201ENST00000364739 CGNQ9P2M7 1197 aaKnown RBP2.12□□□□□ -2.07
RNU4-28P-201ENST00000364739 IGHV3-74A0A0B4J1X5 117 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 TMEM223A0PJW6 202 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 A8MUU9 505 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 SLC25A14O95258 325 aaPredicted RBP2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 FDFT1P37268 417 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 ACAA2P42765 397 aaKnown RBP2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 CX3CR1P49238 355 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 PITPNAQ00169 270 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 CDC20Q12834 499 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 RGNQ15493 299 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 FAM78AQ5JUQ0 283 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 RAET1LQ5VY80 246 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 KDM7AQ6ZMT4 941 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 ABHD13Q7L211 337 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 LHFPL3Q86UP9 236 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 CEP112Q8N8E3 955 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 HSD17B11Q8NBQ5 300 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 TMEM54Q969K7 222 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 C10orf35Q96D05 121 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 HSFY1Q96LI6 401 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 FMO2Q99518 471 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 RNF5Q99942 180 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 PARD6BQ9BYG5 372 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 HPF1Q9NWY4 346 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 SNX6Q9UNH7 406 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 CDHR2Q9BYE9 1310 aa2.11□□□□□ -2.07
RNU4-28P-201ENST00000364739 SCGNO76038 276 aa2.1□□□□□ -2.07
RNU4-28P-201ENST00000364739 FGF1P05230 155 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms