RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 TYROBPO43914 113 aa11.76□□□□□ -0.53
VPS29-201ENST00000360579 ALDOCP09972 364 aaKnown RBP11.76□□□□□ -0.53
VPS29-201ENST00000360579 IL12AP29459 219 aa11.76□□□□□ -0.53
VPS29-201ENST00000360579 PRKAR1BP31321 381 aa11.76□□□□□ -0.53
VPS29-201ENST00000360579 UCP2P55851 309 aa11.76□□□□□ -0.53
VPS29-201ENST00000360579 LCN2P80188 198 aa11.76□□□□□ -0.53
VPS29-201ENST00000360579 IFFO1Q0D2I5 559 aa11.76□□□□□ -0.53
VPS29-201ENST00000360579 TBC1D28Q2M2D7 210 aa11.76□□□□□ -0.53
VPS29-201ENST00000360579 TMEM53Q6P2H8 277 aa11.76□□□□□ -0.53
VPS29-201ENST00000360579 NHLRC1Q6VVB1 395 aa11.76□□□□□ -0.53
VPS29-201ENST00000360579 MIER2Q8N344 545 aa11.76□□□□□ -0.53
VPS29-201ENST00000360579 SLC22A24Q8N4F4 322 aa11.76□□□□□ -0.53
VPS29-201ENST00000360579 BBS10Q8TAM1 723 aa11.76□□□□□ -0.53
VPS29-201ENST00000360579 TRIM44Q96DX7 344 aaPredicted RBP11.76□□□□□ -0.53
VPS29-201ENST00000360579 PKNOX2Q96KN3 472 aa11.76□□□□□ -0.53
VPS29-201ENST00000360579 RMND5AQ9H871 391 aa11.76□□□□□ -0.53
VPS29-201ENST00000360579 TCF7L2Q9NQB0 619 aa11.76□□□□□ -0.53
VPS29-201ENST00000360579 HAO1Q9UJM8 370 aa11.76□□□□□ -0.53
VPS29-201ENST00000360579 ISPDA4D126 451 aa11.75□□□□□ -0.53
VPS29-201ENST00000360579 IGHV3-13P01766 116 aa11.75□□□□□ -0.53
VPS29-201ENST00000360579 BGLAPP02818 100 aa11.75□□□□□ -0.53
VPS29-201ENST00000360579 PATE4P0C8F1 98 aa11.75□□□□□ -0.53
VPS29-201ENST00000360579 AHCYP23526 432 aa11.75□□□□□ -0.53
VPS29-201ENST00000360579 ZFP36P26651 326 aaKnown RBP11.75□□□□□ -0.53
VPS29-201ENST00000360579 SLC1A6P48664 564 aa11.75□□□□□ -0.53
VPS29-201ENST00000360579 ZNF81P51508 661 aa11.75□□□□□ -0.53
VPS29-201ENST00000360579 NCALDP61601 193 aa11.75□□□□□ -0.53
VPS29-201ENST00000360579 PLP2Q04941 152 aa11.75□□□□□ -0.53
VPS29-201ENST00000360579 TSTQ16762 297 aaKnown RBP11.75□□□□□ -0.53
VPS29-201ENST00000360579 SLC36A2Q495M3 483 aa11.75□□□□□ -0.53
VPS29-201ENST00000360579 PAQR4Q8N4S7 273 aaPredicted RBP11.75□□□□□ -0.53
VPS29-201ENST00000360579 CCL17Q92583 94 aa11.75□□□□□ -0.53
VPS29-201ENST00000360579 DUX5Q96PT3 197 aa11.75□□□□□ -0.53
VPS29-201ENST00000360579 ROPN1BQ9BZX4 212 aaPredicted RBP11.75□□□□□ -0.53
VPS29-201ENST00000360579 EGLN1Q9GZT9 426 aa11.75□□□□□ -0.53
VPS29-201ENST00000360579 OR51B6Q9H340 312 aa11.75□□□□□ -0.53
VPS29-201ENST00000360579 RAD21L1Q9H4I0 556 aa11.75□□□□□ -0.53
VPS29-201ENST00000360579 RNF121Q9H920 327 aa11.75□□□□□ -0.53
VPS29-201ENST00000360579 ROPN1Q9HAT0 212 aaPredicted RBP11.75□□□□□ -0.53
VPS29-201ENST00000360579 SLC6A13Q9NSD5 602 aa11.75□□□□□ -0.53
VPS29-201ENST00000360579 UBAP1Q9NZ09 502 aa11.75□□□□□ -0.53
VPS29-201ENST00000360579 GLTPQ9NZD2 209 aa11.75□□□□□ -0.53
VPS29-201ENST00000360579 PURGQ9UJV8 347 aaKnown RBP11.75□□□□□ -0.53
VPS29-201ENST00000360579 AUP1Q9Y679 476 aa11.75□□□□□ -0.53
VPS29-201ENST00000360579 CACNG2Q9Y698 323 aa11.75□□□□□ -0.53
VPS29-201ENST00000360579 IQCMA0A1B0GVH7 501 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 PLSCR5A0PG75 271 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 WDR91A4D1P6 747 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 C5orf58C9J3I9 102 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 PLPP3O14495 311 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 SERPINI2O75830 405 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 MFN2O95140 757 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 OR6A2O95222 327 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 ETS2P15036 469 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 HTR2AP28223 471 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 GCH1P30793 250 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 BIDP55957 195 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 NRN1LQ496H8 165 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 UNQ6126/PRO20091Q6UXV3 157 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 MSANTD1Q6ZTZ1 278 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 C10orf53Q8N6V4 93 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 ICA1LQ8NDH6 482 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 DEFB108BQ8NET1 73 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 OR6X1Q8NH79 312 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 FGFBP3Q8TAT2 258 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 TMEM54Q969K7 222 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 ITCHQ96J02 903 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 SORT1Q99523 831 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 SPATA5L1Q9BVQ7 753 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 C20orf27Q9GZN8 174 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 TMEM27Q9HBJ8 222 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 A4GALTQ9NPC4 353 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 CYSLTR2Q9NS75 346 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 TMEM38BQ9NVV0 291 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 ZNF69Q9UC07 566 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 TESQ9UGI8 421 aaKnown RBP11.74□□□□□ -0.53
VPS29-201ENST00000360579 LEF1Q9UJU2 399 aaPredicted RBP11.74□□□□□ -0.53
VPS29-201ENST00000360579 NOTCH1P46531 2555 aa11.74□□□□□ -0.53
VPS29-201ENST00000360579 SLC22A3O75751 556 aa11.73□□□□□ -0.53
VPS29-201ENST00000360579 MT-ATP6P00846 226 aa11.73□□□□□ -0.53
VPS29-201ENST00000360579 ADORA3P0DMS8 318 aa11.73□□□□□ -0.53
VPS29-201ENST00000360579 CCL2P13500 99 aa11.73□□□□□ -0.53
VPS29-201ENST00000360579 IDO1P14902 403 aa11.73□□□□□ -0.53
VPS29-201ENST00000360579 MAKP20794 623 aa11.73□□□□□ -0.53
VPS29-201ENST00000360579 LIPAP38571 399 aa11.73□□□□□ -0.53
VPS29-201ENST00000360579 ERVS71-1P61550 626 aa11.73□□□□□ -0.53
VPS29-201ENST00000360579 ZNF154Q13106 437 aa11.73□□□□□ -0.53
VPS29-201ENST00000360579 FADDQ13158 208 aa11.73□□□□□ -0.53
VPS29-201ENST00000360579 SLC16A14Q7RTX9 510 aa11.73□□□□□ -0.53
VPS29-201ENST00000360579 OR1J1Q8NGS3 322 aa11.73□□□□□ -0.53
VPS29-201ENST00000360579 OR5J2Q8NH18 312 aa11.73□□□□□ -0.53
VPS29-201ENST00000360579 ZNF566Q969W8 418 aa11.73□□□□□ -0.53
VPS29-201ENST00000360579 C1orf147Q96MC9 270 aaPredicted RBP11.73□□□□□ -0.53
VPS29-201ENST00000360579 MOGAT1Q96PD6 335 aa11.73□□□□□ -0.53
VPS29-201ENST00000360579 SH3GL3Q99963 347 aa11.73□□□□□ -0.53
VPS29-201ENST00000360579 TMEM43Q9BTV4 400 aa11.73□□□□□ -0.53
VPS29-201ENST00000360579 MRI1Q9BV20 369 aa11.73□□□□□ -0.53
VPS29-201ENST00000360579 C1QTNF5Q9BXJ0 243 aa11.73□□□□□ -0.53
VPS29-201ENST00000360579 CGGBP1Q9UFW8 167 aaPredicted RBP11.73□□□□□ -0.53
VPS29-201ENST00000360579 POLR3KQ9Y2Y1 108 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms