RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 DVL3Q92997 716 aaPredicted RBP12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 CSAG2Q9Y5P2 127 aa12.26□□□□□ -0.45
SRGAP3-201ENST00000360413 SCGB1C2P0DMR2 95 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 UBE2G1P62253 170 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 CHRNEQ04844 493 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 LYSMD4Q5XG99 296 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 PODNL1Q6PEZ8 512 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 UBAC2Q8NBM4 344 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 TVP23CQ96ET8 276 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 SGPP1Q9BX95 441 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 ACKR3P25106 362 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 IL10RAQ13651 578 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 GPR18Q14330 331 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 IER5LQ5T953 404 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 RHOUQ7L0Q8 258 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 ZNF595Q8IYB9 648 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 GPR119Q8TDV5 335 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 SECTM1Q8WVN6 248 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 PHYHIPQ92561 330 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 SYT17Q9BSW7 474 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 BCO1Q9HAY6 547 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 MED9Q9NWA0 146 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 MED16Q9Y2X0 877 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 XCR1P46094 333 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 TBC1D28Q2M2D7 210 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 IAH1Q2TAA2 248 aaPredicted RBP12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 UMODL1-AS1Q8N2C9 162 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 AK3Q9UIJ7 227 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 C10orf71Q711Q0 1435 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 H3BML4 177 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 FBP1P09467 338 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 STT3BQ8TCJ2 826 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 ARHGDIGQ99819 225 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 ULBP2Q9BZM5 246 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 OR51I2Q9H344 312 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 PHF1O43189 567 aaPredicted RBP12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 ZNF90Q03938 601 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 Q6ZVL8 140 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 SLC16A14Q7RTX9 510 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 OR51A2Q8NGJ7 313 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 NPY6RQ99463 290 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 SLC25A21Q9BQT8 299 aaPredicted RBP12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 XYLT2Q9H1B5 865 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 LYRM2Q9NU23 88 aaPredicted RBP12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 MOKQ9UQ07 419 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 CHD3Q12873 2000 aaKnown RBP12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 ZNF816-ZNF321PA0A0X1KG74 233 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 TRABD2BA6NFA1 517 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 FRS3O43559 492 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 OR2F2O95006 317 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 FABP4P15090 132 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 OR2F1Q13607 317 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 CEBPEQ15744 281 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 PGGHGQ32M88 737 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 SIGIRRQ6IA17 410 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 AMIGO3Q86WK7 504 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 IGSF21Q96ID5 467 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 NID2Q14112 1375 aa12.25□□□□□ -0.45
SRGAP3-201ENST00000360413 POM121BA6NF01 834 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 RFPL4AA6NLU0 287 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 RFPL4AL1F8VTS6 287 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 CSO75390 466 aaKnown RBP12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 ITGB7P26010 798 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 MTNR1BP49286 362 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 MOGAT2Q3SYC2 334 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 ISG20Q96AZ6 181 aaKnown RBP12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 ZNFX1Q9P2E3 1918 aaKnown RBP12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 PSORS1C1Q9UIG5 152 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 ZNF407Q9C0G0 2248 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 ACOD1A6NK06 481 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 PPP1R3BQ86XI6 285 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 ZNF680Q8NEM1 530 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 CTRCQ99895 268 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 ABHD6Q9BV23 337 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 PTRH2Q9Y3E5 179 aaKnown RBP12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 NPIPB15A6NHN6 443 aaPredicted RBP12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 ZNF207O43670 478 aaKnown RBP12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 PCSK6P29122 969 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 ELLP55199 621 aaPredicted RBP12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 TPBGQ13641 420 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 EXOSC2Q13868 293 aaKnown RBP12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 OR7A5Q15622 319 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 Q1RN00 199 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 SOX7Q9BT81 388 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 GSTO2Q9H4Y5 243 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 M0QYG6 137 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 JTBO76095 146 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 HOXA11P31270 313 aaPredicted RBP12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 RPS19P39019 145 aaKnown RBP12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 TPPP2P59282 170 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 ENDOGQ14249 297 aaKnown RBP12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 OR6M1Q8NGM8 313 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 ALOXE3Q9BYJ1 711 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 OR52D1Q9H346 318 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 PLEKHF2Q9H8W4 249 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 FOXA1P55317 472 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 MTCP1P56278 107 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 SLC35A2P78381 396 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 ADPRMQ3LIE5 342 aa12.24□□□□□ -0.45
SRGAP3-201ENST00000360413 CGB2Q6NT52 195 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms