RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 OR6C76A6NM76 312 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 SPINT2O43291 252 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 ELK1P19419 428 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 TAGLN2P37802 199 aaKnown RBP16.94■□□□□ 0.3
SHANK1-202ENST00000359082 ELLP55199 621 aaPredicted RBP16.94■□□□□ 0.3
SHANK1-202ENST00000359082 SLC35A2P78381 396 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 DMWDQ09019 674 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 GAB3Q8WWW8 586 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 OR11A1Q9GZK7 315 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 IGHV3-20A0A0C4DH32 117 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 ZNF732B4DXR9 585 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 TCN2P20062 427 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 OR10K2Q6IF99 312 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 NLRP8Q86W28 1048 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 NAXDQ8IW45 347 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 GOT1L1Q8NHS2 421 aaPredicted RBP16.94■□□□□ 0.3
SHANK1-202ENST00000359082 MYH1P12882 1939 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 OR13C7P0DN81 318 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 CNR1P21554 472 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 EIF2DP41214 584 aaKnown RBP16.94■□□□□ 0.3
SHANK1-202ENST00000359082 OR5M11Q96RB7 305 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 MS4A8Q9BY19 250 aa16.94■□□□□ 0.3
SHANK1-202ENST00000359082 PRELID3BQ9Y3B1 194 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 ZNF749O43361 778 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 B3GALT4O96024 378 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 ERVFC1P60507 584 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 SLC46A3Q7Z3Q1 461 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 SPRED1Q7Z699 444 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 ZNF687Q8N1G0 1237 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 FAM3DQ96BQ1 224 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 LANCL2Q9NS86 450 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 CRYBG1Q9Y4K1 1723 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 LAP3P28838 519 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 TRHRP34981 398 aaPredicted RBP16.93■□□□□ 0.3
SHANK1-202ENST00000359082 ETV6P41212 452 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 SRPXP78539 464 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 ZNF468Q5VIY5 522 aaPredicted RBP16.93■□□□□ 0.3
SHANK1-202ENST00000359082 PAPD4Q6PIY7 484 aaKnown RBP16.93■□□□□ 0.3
SHANK1-202ENST00000359082 SLCO4C1Q6ZQN7 724 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 GAREM2Q75VX8 874 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 ADGRE4PQ86SQ3 457 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 LRFN5Q96NI6 719 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 MRPL22Q9NWU5 206 aaKnown RBP16.93■□□□□ 0.3
SHANK1-202ENST00000359082 PSMB3P49720 205 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 PRSS45Q7RTY3 260 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 FAM174AQ8TBP5 190 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 C20orf24Q9BUV8 137 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 HEYLQ9NQ87 328 aaPredicted RBP16.93■□□□□ 0.3
SHANK1-202ENST00000359082 TAPBPO15533 448 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 SRMP19623 302 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 POLR2IP36954 125 aaKnown RBP16.93■□□□□ 0.3
SHANK1-202ENST00000359082 GDPD3Q7L5L3 318 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 SKA3Q8IX90 412 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 LSMEM2Q8N112 164 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 ZNF511Q8NB15 262 aa16.93■□□□□ 0.3
SHANK1-202ENST00000359082 KCTD12Q96CX2 325 aaKnown RBP16.93■□□□□ 0.3
SHANK1-202ENST00000359082 DIMT1Q9UNQ2 313 aaKnown RBP16.93■□□□□ 0.3
SHANK1-202ENST00000359082 A0A1W2PPH5 198 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 OR5K3A6NET4 321 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 LRRC30A6NM36 301 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 AKR7A3O95154 331 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 SIX6O95475 246 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 CLEC2LP0C7M8 214 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 ADAMTSL4Q6UY14 1074 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 RNF141Q8WVD5 230 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 SLC46A1Q96NT5 459 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 CRYM-AS1A6NIL9 109 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 TXNDC12O95881 172 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 F2RP25116 425 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 RTL10Q7L3V2 364 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 KCNJ15Q99712 375 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 SHARPINQ9H0F6 387 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 CGGBP1Q9UFW8 167 aaPredicted RBP16.92■□□□□ 0.3
SHANK1-202ENST00000359082 COA3Q9Y2R0 106 aaPredicted RBP16.92■□□□□ 0.3
SHANK1-202ENST00000359082 ETV7Q9Y603 341 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 TCRBP04435 133 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 CALCBP10092 127 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 HNF1AP20823 631 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 AGFG1P52594 562 aaKnown RBP16.92■□□□□ 0.3
SHANK1-202ENST00000359082 UBTD2Q8WUN7 234 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 ZFPM2Q8WW38 1151 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 RNF170Q96K19 258 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 BANF2Q9H503 90 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 GPR173Q9NS66 373 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 TOPAZ1Q8N9V7 1692 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 TEX51A0A1B0GUA7 166 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 PRAMEF25A6NGN4 478 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 IAH1Q2TAA2 248 aaPredicted RBP16.92■□□□□ 0.3
SHANK1-202ENST00000359082 PSD2Q9BQI7 771 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 RAB22AQ9UL26 194 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 FAM166BA8MTA8 275 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 TRIM23P36406 574 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 ADPRMQ3LIE5 342 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 TMEM178AQ8NBL3 297 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 HSD17B11Q8NBQ5 300 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 SEC22CQ9BRL7 303 aa16.92■□□□□ 0.3
SHANK1-202ENST00000359082 CCSO14618 274 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 ZNF133P52736 654 aaPredicted RBP16.91■□□□□ 0.3
SHANK1-202ENST00000359082 FAM122CQ6P4D5 195 aa16.91■□□□□ 0.3
SHANK1-202ENST00000359082 UCN3Q969E3 161 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms