RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 TTLL8A6PVC2 850 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 SLC30A4O14863 429 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 F10P00742 488 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 SCG5P05408 212 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 HK1P19367 917 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 CXCR1P25024 350 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 SLC6A6P31641 620 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 RPS25P62851 125 aaKnown RBP11.43□□□□□ -0.58
GGPS1-202ENST00000358966 MXD1Q05195 221 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 ZNF440Q8IYI8 595 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 RDH10Q8IZV5 341 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 PROKR2Q8NFJ6 384 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 OR5W2Q8NH69 310 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 SPRYD4Q8WW59 207 aaPredicted RBP11.43□□□□□ -0.58
GGPS1-202ENST00000358966 RASL10BQ96S79 203 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 TEAD3Q99594 435 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 GAL3ST1Q99999 423 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 DEFB126Q9BYW3 111 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 SLC22A4Q9H015 551 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 ZNF160Q9HCG1 818 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 EXOSC3Q9NQT5 275 aaKnown RBP11.43□□□□□ -0.58
GGPS1-202ENST00000358966 ZNF275Q9NSD4 429 aaPredicted RBP11.43□□□□□ -0.58
GGPS1-202ENST00000358966 ASB6Q9NWX5 421 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 SLC22A23A1A5C7 686 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 PSMD9O00233 223 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 GPANK1O95872 356 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 GP1BAP07359 652 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 ACSM4P0C7M7 580 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 COX6A1P12074 109 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 PAICSP22234 425 aaKnown RBP11.43□□□□□ -0.58
GGPS1-202ENST00000358966 OTX2P32243 289 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 WNT4P56705 351 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 RPL18Q07020 188 aaKnown RBP11.43□□□□□ -0.58
GGPS1-202ENST00000358966 PUDPQ08623 228 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 EXOSC2Q13868 293 aaKnown RBP11.43□□□□□ -0.58
GGPS1-202ENST00000358966 ETFDHQ16134 617 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 TATDN3Q17R31 274 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 HSD17B12Q53GQ0 312 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 KLHL22Q53GT1 634 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 C3orf38Q5JPI3 329 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 IL20RBQ6UXL0 311 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 RPTNQ6XPR3 784 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 MEPCEQ7L2J0 689 aaKnown RBP11.43□□□□□ -0.58
GGPS1-202ENST00000358966 GDPD1Q8N9F7 314 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 ASB15Q8WXK1 588 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 RFKQ969G6 155 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 ARL5BQ96KC2 179 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 GLS2Q9UI32 602 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 ZNF337Q9Y3M9 751 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 PCSK5Q92824 1860 aa11.43□□□□□ -0.58
GGPS1-202ENST00000358966 DMXL2Q8TDJ6 3036 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 IGHV1-45A0A0A0MS14 117 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 TMEM72A0PK05 275 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 C9J4A7 227 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 H3BML4 177 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 DCTN6O00399 190 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 SUSD5O60279 629 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 EIF1BO60739 113 aaKnown RBP11.42□□□□□ -0.58
GGPS1-202ENST00000358966 ITGA10O75578 1167 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 RAF1P04049 648 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 TCN2P20062 427 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 AHCYP23526 432 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 PYCR1P32322 319 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 EIF1P41567 113 aaKnown RBP11.42□□□□□ -0.58
GGPS1-202ENST00000358966 RPS27P42677 84 aaKnown RBP11.42□□□□□ -0.58
GGPS1-202ENST00000358966 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.42□□□□□ -0.58
GGPS1-202ENST00000358966 TRA2AQ13595 282 aaKnown RBP eCLIP11.42□□□□□ -0.58
GGPS1-202ENST00000358966 KLBQ86Z14 1044 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 OR6K6Q8NGW6 343 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 NUBPLQ8TB37 319 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 TIMP4Q99727 224 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 KCNS3Q9BQ31 491 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 DPCDQ9BVM2 203 aaPredicted RBP11.42□□□□□ -0.58
GGPS1-202ENST00000358966 ADAM19Q9H013 955 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 FGF20Q9NP95 211 aaPredicted RBP11.42□□□□□ -0.58
GGPS1-202ENST00000358966 MED17Q9NVC6 651 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 FAM86C1Q9NVL1 165 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 MCUBQ9NWR8 336 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 TRAPPC4Q9Y296 219 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 ZFAND5O76080 213 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 JMJD7P0C870 316 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 PNMTP11086 282 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 CDKN2AP42771 156 aaKnown RBP11.42□□□□□ -0.58
GGPS1-202ENST00000358966 P2RX1P51575 399 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 BPIFB3P59826 476 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 CTXN1P60606 82 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 RPS4XP62701 263 aaKnown RBP11.42□□□□□ -0.58
GGPS1-202ENST00000358966 MAB21L1Q13394 359 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 C1DQ13901 141 aaKnown RBP11.42□□□□□ -0.58
GGPS1-202ENST00000358966 CBFBQ13951 182 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 DCAF12Q5T6F0 453 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 EEF1A1P5Q5VTE0 462 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 C17orf47Q8NEP4 570 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 OR11G2Q8NGC1 345 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 HGDQ93099 445 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 TMED9Q9BVK6 235 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 HEXA-AS1Q9H8Q6 139 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 TAS2R10Q9NYW0 307 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 FBXL2Q9UKC9 423 aa11.42□□□□□ -0.58
GGPS1-202ENST00000358966 ALG5Q9Y673 324 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms