RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 SLC38A2Q96QD8 506 aa13.46□□□□□ -0.25
TPM1-206ENST00000358278 MRPL13Q9BYD1 178 aaKnown RBP13.46□□□□□ -0.25
TPM1-206ENST00000358278 LINC00470Q9BZP3 86 aa13.46□□□□□ -0.25
TPM1-206ENST00000358278 GLTPQ9NZD2 209 aa13.46□□□□□ -0.25
TPM1-206ENST00000358278 KLHL21Q9UJP4 597 aa13.46□□□□□ -0.25
TPM1-206ENST00000358278 PRSS37A4D1T9 235 aa13.45□□□□□ -0.26
TPM1-206ENST00000358278 A8MXE2 369 aa13.45□□□□□ -0.26
TPM1-206ENST00000358278 RENP00797 406 aa13.45□□□□□ -0.26
TPM1-206ENST00000358278 HMGN1P05114 100 aa13.45□□□□□ -0.26
TPM1-206ENST00000358278 ASCL1P50553 236 aa13.45□□□□□ -0.26
TPM1-206ENST00000358278 PTCHD4Q6ZW05 846 aa13.45□□□□□ -0.26
TPM1-206ENST00000358278 FNDC8Q8TC99 324 aa13.45□□□□□ -0.26
TPM1-206ENST00000358278 TMEM54Q969K7 222 aa13.45□□□□□ -0.26
TPM1-206ENST00000358278 RBP7Q96R05 134 aa13.45□□□□□ -0.26
TPM1-206ENST00000358278 MBOAT4Q96T53 435 aa13.45□□□□□ -0.26
TPM1-206ENST00000358278 NMNAT3Q96T66 252 aa13.45□□□□□ -0.26
TPM1-206ENST00000358278 SYT4Q9H2B2 425 aa13.45□□□□□ -0.26
TPM1-206ENST00000358278 CRLF2Q9HC73 371 aa13.45□□□□□ -0.26
TPM1-206ENST00000358278 KCNJ16Q9NPI9 418 aa13.45□□□□□ -0.26
TPM1-206ENST00000358278 CMC2Q9NRP2 79 aa13.45□□□□□ -0.26
TPM1-206ENST00000358278 TVP23BQ9NYZ1 205 aa13.45□□□□□ -0.26
TPM1-206ENST00000358278 JKAMPQ9P055 326 aa13.45□□□□□ -0.26
TPM1-206ENST00000358278 NKX2-6A6NCS4 301 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 CLDN14O95500 239 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 QDPRP09417 244 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 CDKN2AP42771 156 aaKnown RBP13.44□□□□□ -0.26
TPM1-206ENST00000358278 ROR2Q01974 943 aaKnown RBP13.44□□□□□ -0.26
TPM1-206ENST00000358278 FMODQ06828 376 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 SNAPC1Q16533 368 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 PHYHD1Q5SRE7 291 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 THEM4Q5T1C6 240 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 C9orf135Q5VTT2 229 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 ZNF474Q6S9Z5 364 aaPredicted RBP13.44□□□□□ -0.26
TPM1-206ENST00000358278 FAM26EQ8N5C1 309 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 CYB561A3Q8NBI2 242 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 ZNF555Q8NEP9 628 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 LRRC46Q96FV0 321 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 RBM24Q9BX46 236 aaKnown RBP13.44□□□□□ -0.26
TPM1-206ENST00000358278 GRIP2Q9C0E4 1043 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 UTP20O75691 2785 aaKnown RBP13.44□□□□□ -0.26
TPM1-206ENST00000358278 SLC22A23A1A5C7 686 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 SURF4O15260 269 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 AHCYL1O43865 530 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 SLC2A10O95528 541 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 CDSNQ15517 529 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 SNCBQ16143 134 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 HIST3H3Q16695 136 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 SLX4IPQ5VYV7 408 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 GABRG1Q8N1C3 465 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 CYGBQ8WWM9 190 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 MCHR2Q969V1 340 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 OTULINQ96BN8 352 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 HRASLS5Q96KN8 279 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 RERGLQ9H628 205 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 GPR35Q9HC97 309 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 RPRD1BQ9NQG5 326 aaKnown RBP13.44□□□□□ -0.26
TPM1-206ENST00000358278 GALNT8Q9NY28 637 aa13.44□□□□□ -0.26
TPM1-206ENST00000358278 VSX1Q9NZR4 365 aaPredicted RBP13.44□□□□□ -0.26
TPM1-206ENST00000358278 ANKHD1Q8IWZ3 2542 aaKnown RBP13.44□□□□□ -0.26
TPM1-206ENST00000358278 DLGAP1O14490 977 aa13.43□□□□□ -0.26
TPM1-206ENST00000358278 PAICSP22234 425 aaKnown RBP13.43□□□□□ -0.26
TPM1-206ENST00000358278 MPGP29372 298 aa13.43□□□□□ -0.26
TPM1-206ENST00000358278 VHLP40337 213 aa13.43□□□□□ -0.26
TPM1-206ENST00000358278 AQP4P55087 323 aa13.43□□□□□ -0.26
TPM1-206ENST00000358278 CDC42P60953 191 aa13.43□□□□□ -0.26
TPM1-206ENST00000358278 CRMP1Q14194 572 aa13.43□□□□□ -0.26
TPM1-206ENST00000358278 P2RY6Q15077 328 aa13.43□□□□□ -0.26
TPM1-206ENST00000358278 CEACAM16Q2WEN9 425 aa13.43□□□□□ -0.26
TPM1-206ENST00000358278 C12orf73Q69YU5 71 aa13.43□□□□□ -0.26
TPM1-206ENST00000358278 LINGO2Q7L985 606 aa13.43□□□□□ -0.26
TPM1-206ENST00000358278 SLC37A3Q8NCC5 494 aa13.43□□□□□ -0.26
TPM1-206ENST00000358278 NPEPL1Q8NDH3 523 aa13.43□□□□□ -0.26
TPM1-206ENST00000358278 FAM81AQ8TBF8 368 aa13.43□□□□□ -0.26
TPM1-206ENST00000358278 SSC4DQ8WTU2 575 aa13.43□□□□□ -0.26
TPM1-206ENST00000358278 NSMAFQ92636 917 aa13.43□□□□□ -0.26
TPM1-206ENST00000358278 SNX18Q96RF0 628 aa13.43□□□□□ -0.26
TPM1-206ENST00000358278 FN3KQ9H479 309 aa13.43□□□□□ -0.26
TPM1-206ENST00000358278 FAM118AQ9NWS6 357 aa13.43□□□□□ -0.26
TPM1-206ENST00000358278 IMPAD1Q9NX62 359 aa13.43□□□□□ -0.26
TPM1-206ENST00000358278 TAS2R16Q9NYV7 291 aa13.43□□□□□ -0.26
TPM1-206ENST00000358278 GPR52Q9Y2T5 361 aa13.43□□□□□ -0.26
TPM1-206ENST00000358278 GMPPBQ9Y5P6 360 aa13.43□□□□□ -0.26
TPM1-206ENST00000358278 DOPEY2Q9Y3R5 2298 aa13.43□□□□□ -0.26
TPM1-206ENST00000358278 PRR14LQ5THK1 2151 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 LOC100130705A0A1B0GUX0 176 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 OR6C68A6NDL8 312 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 M0R129 80 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 SLC16A7O60669 478 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 LYZL6O75951 148 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 IGHV1-2P23083 117 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 CRABP1P29762 137 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 ZNF84P51523 738 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 TGFBR3Q03167 851 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 LRFN4Q6PJG9 635 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 DNM1P34Q6PK57 102 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 IZUMO2Q6UXV1 221 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 CXorf67Q86X51 503 aaPredicted RBP13.42□□□□□ -0.26
TPM1-206ENST00000358278 DHRSXQ8N5I4 330 aa13.42□□□□□ -0.26
TPM1-206ENST00000358278 KISS1RQ969F8 398 aaPredicted RBP13.42□□□□□ -0.26
TPM1-206ENST00000358278 ELOVL5Q9NYP7 299 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms