RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 HCRTR2O43614 444 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 EIF4E2O60573 245 aaKnown RBP12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 CPNE3O75131 537 aaKnown RBP12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 TCRBP04435 133 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 SNRPBP14678 240 aaKnown RBP12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 STOMP27105 288 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 CCKBRP32239 447 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 PSMB10P40306 273 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 RPL18Q07020 188 aaKnown RBP12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 Q5BKY6 102 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 ZNF684Q5T5D7 378 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 PHF19Q5T6S3 580 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 CD276Q5ZPR3 534 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 WDR74Q6RFH5 385 aaPredicted RBP12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 ZNF767PQ75MW2 155 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 SLC16A9Q7RTY1 509 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 OR4D9Q8NGE8 314 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 OR1N1Q8NGS0 311 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 SMIM4Q8WVI0 70 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 OMA1Q96E52 524 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 OR14A2Q96R54 314 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 FKRPQ9H9S5 495 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 PLEKHA1Q9HB21 404 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 EMC3Q9P0I2 261 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 MKL2Q9ULH7 1088 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 PCDHGA9Q9Y5G4 932 aaKnown RBP12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 APC2O95996 2303 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 FAM208BQ5VWN6 2430 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 ZFYVE26Q68DK2 2539 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 ACACAQ13085 2346 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 TRABD2BA6NFA1 517 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 FAM171A2A8MVW0 826 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 ALG1L2C9J202 215 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 NDUFB5O43674 189 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 GMFGO60234 142 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 ZNF780AO75290 641 aaPredicted RBP12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 TPPPO94811 219 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 ALX3O95076 343 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 HIST1H2ABP04908 130 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 F13BP05160 661 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 SRMP19623 302 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 CLPPQ16740 277 aaPredicted RBP12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 TMEM71Q6P5X7 295 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 HIST3H2AQ7L7L0 130 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 SIAH3Q8IW03 269 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 ZNF441Q8N8Z8 693 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 ZNF671Q8TAW3 534 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 HIST1H2ACQ93077 130 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 TAAR8Q969N4 342 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 TSPAN32Q96QS1 320 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 ZNF768Q9H5H4 540 aaKnown RBP12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 FGF21Q9NSA1 209 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 ING4Q9UNL4 249 aa12.92□□□□□ -0.34
NIPAL3-203ENST00000358028 MPDZO75970 2070 aa12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 ARPC4-TTLL3A0A0A6YYG9 625 aa12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 A0A1W2PPK0 400 aa12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 AIPO00170 330 aa12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 SULT1B1O43704 296 aa12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 CDC40O60508 579 aaKnown RBP eCLIP12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 BGLAPP02818 100 aa12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 CXCR1P25024 350 aa12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 MAPK3P27361 379 aaPredicted RBP12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 ITPKBP27987 946 aa12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 GRPRP30550 384 aa12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 PNLIPRP2P54317 469 aa12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 TOMM34Q15785 309 aaPredicted RBP12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 MESTQ5EB52 335 aa12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 BCL2L15Q5TBC7 163 aa12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 BTN2A1Q7KYR7 527 aa12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 FAM220AQ7Z4H9 259 aa12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 ZNF511Q8NB15 262 aa12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 PLPP5Q8NEB5 264 aa12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 DEDD2Q8WXF8 326 aa12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 LIN37Q96GY3 246 aaPredicted RBP12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 CACNG6Q9BXT2 260 aa12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 TBL1XR1Q9BZK7 514 aa12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 RANBP3Q9H6Z4 567 aaPredicted RBP12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 NUDT15Q9NV35 164 aa12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 GRHPRQ9UBQ7 328 aa12.91□□□□□ -0.34
NIPAL3-203ENST00000358028 TRAV36DV7A0A075B6V5 113 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 IFITM5A6NNB3 132 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 HSPB2A8KAH6 182 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 C17orf51A8MQB3 221 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 PRR32B1ATL7 298 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 ZNF432O94892 652 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 ECDO95905 644 aaPredicted RBP12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 GP1BBP13224 206 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 PGCP20142 388 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 ABCD3P28288 659 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 EVI2BP34910 448 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 GABREP78334 506 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 MRPS10P82664 201 aaKnown RBP12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 DGCR2P98153 550 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 KLF9Q13886 244 aaPredicted RBP12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 HSPB2Q16082 182 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 BTBD16Q32M84 506 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 C6orf183Q5T699 404 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 FAM69AQ5T7M9 428 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 GPR139Q6DWJ6 353 aa12.9□□□□□ -0.34
NIPAL3-203ENST00000358028 ZNF782Q6ZMW2 699 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms