RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 GPR137CQ8N3F9 429 aa13.11□□□□□ -0.31
CCNE1-202ENST00000357943 POMGNT2Q8NAT1 580 aa13.11□□□□□ -0.31
CCNE1-202ENST00000357943 NPEPL1Q8NDH3 523 aa13.11□□□□□ -0.31
CCNE1-202ENST00000357943 MCHR2Q969V1 340 aa13.11□□□□□ -0.31
CCNE1-202ENST00000357943 LINC00470Q9BZP3 86 aa13.11□□□□□ -0.31
CCNE1-202ENST00000357943 SYT4Q9H2B2 425 aa13.11□□□□□ -0.31
CCNE1-202ENST00000357943 CRLF2Q9HC73 371 aa13.11□□□□□ -0.31
CCNE1-202ENST00000357943 CMC2Q9NRP2 79 aa13.11□□□□□ -0.31
CCNE1-202ENST00000357943 ASB6Q9NWX5 421 aa13.11□□□□□ -0.31
CCNE1-202ENST00000357943 TVP23BQ9NYZ1 205 aa13.11□□□□□ -0.31
CCNE1-202ENST00000357943 SLC22A23A1A5C7 686 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 WIPF3A6NGB9 483 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 OR6C65A6NJZ3 312 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 CENPBD1B2RD01 187 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 E9PQ18 207 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 M0R129 80 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 SURF4O15260 269 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 QDPRP09417 244 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 AGAP20933 346 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 GRK5P34947 590 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 SLC25A35Q3KQZ1 300 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 C9orf135Q5VTT2 229 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 SLX4IPQ5VYV7 408 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 BEND4Q6ZU67 534 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 ADCK1Q86TW2 530 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 JAZF1Q86VZ6 243 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 ZNF808Q8N4W9 903 aaPredicted RBP13.1□□□□□ -0.31
CCNE1-202ENST00000357943 CYB561A3Q8NBI2 242 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 NMD3Q96D46 503 aaKnown RBP13.1□□□□□ -0.31
CCNE1-202ENST00000357943 RDH12Q96NR8 316 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 TSSK2Q96PF2 358 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 DDOQ99489 341 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 ALG12Q9BV10 488 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 ULBP2Q9BZM5 246 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 VCXQ9H320 206 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 VSX1Q9NZR4 365 aaPredicted RBP13.1□□□□□ -0.31
CCNE1-202ENST00000357943 GPR52Q9Y2T5 361 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 USP9XQ93008 2570 aaPredicted RBP13.1□□□□□ -0.31
CCNE1-202ENST00000357943 TENM4Q6N022 2769 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 OR6C68A6NDL8 312 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 H0YJX3 145 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 CNOT4O95628 575 aaKnown RBP13.1□□□□□ -0.31
CCNE1-202ENST00000357943 IGHV1-2P23083 117 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 ROR2Q01974 943 aaKnown RBP13.1□□□□□ -0.31
CCNE1-202ENST00000357943 CRMP1Q14194 572 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 SNAPC1Q16533 368 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 C12orf73Q69YU5 71 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 SLC37A3Q8NCC5 494 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 HRASLS5Q96KN8 279 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 RBP7Q96R05 134 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 FN3KQ9H479 309 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 GPR35Q9HC97 309 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 FAM118AQ9NWS6 357 aa13.1□□□□□ -0.31
CCNE1-202ENST00000357943 LOC100130705A0A1B0GUX0 176 aa13.09□□□□□ -0.31
CCNE1-202ENST00000357943 FAM183AA6NL82 134 aa13.09□□□□□ -0.31
CCNE1-202ENST00000357943 ZNF587BE7ETH6 402 aa13.09□□□□□ -0.31
CCNE1-202ENST00000357943 DCTN6O00399 190 aa13.09□□□□□ -0.31
CCNE1-202ENST00000357943 CLDN14O95500 239 aa13.09□□□□□ -0.31
CCNE1-202ENST00000357943 HMGN1P05114 100 aa13.09□□□□□ -0.31
CCNE1-202ENST00000357943 ITGA5P08648 1049 aa13.09□□□□□ -0.31
CCNE1-202ENST00000357943 CTLA4P16410 223 aa13.09□□□□□ -0.31
CCNE1-202ENST00000357943 ASCL1P50553 236 aa13.09□□□□□ -0.31
CCNE1-202ENST00000357943 FAM27E3Q08E93 113 aa13.09□□□□□ -0.31
CCNE1-202ENST00000357943 ETFDHQ16134 617 aa13.09□□□□□ -0.31
CCNE1-202ENST00000357943 CEACAM16Q2WEN9 425 aa13.09□□□□□ -0.31
CCNE1-202ENST00000357943 THEM4Q5T1C6 240 aa13.09□□□□□ -0.31
CCNE1-202ENST00000357943 FAM26EQ8N5C1 309 aa13.09□□□□□ -0.31
CCNE1-202ENST00000357943 NSMAFQ92636 917 aa13.09□□□□□ -0.31
CCNE1-202ENST00000357943 RBM24Q9BX46 236 aaKnown RBP13.09□□□□□ -0.31
CCNE1-202ENST00000357943 TEX12Q9BXU0 123 aa13.09□□□□□ -0.31
CCNE1-202ENST00000357943 NUAK2Q9H093 628 aa13.09□□□□□ -0.31
CCNE1-202ENST00000357943 RPRD1BQ9NQG5 326 aaKnown RBP13.09□□□□□ -0.31
CCNE1-202ENST00000357943 GALNT8Q9NY28 637 aa13.09□□□□□ -0.31
CCNE1-202ENST00000357943 KLHL21Q9UJP4 597 aa13.09□□□□□ -0.31
CCNE1-202ENST00000357943 NDRG4Q9ULP0 352 aaKnown RBP13.09□□□□□ -0.31
CCNE1-202ENST00000357943 CLEC18AA5D8T8 446 aa13.08□□□□□ -0.32
CCNE1-202ENST00000357943 RIIAD1A6NNX1 92 aa13.08□□□□□ -0.32
CCNE1-202ENST00000357943 RPL36A-HNRNPH2H7BZ11 118 aa13.08□□□□□ -0.32
CCNE1-202ENST00000357943 SLC16A6O15403 523 aa13.08□□□□□ -0.32
CCNE1-202ENST00000357943 PRKYO43930 277 aa13.08□□□□□ -0.32
CCNE1-202ENST00000357943 LYZL6O75951 148 aa13.08□□□□□ -0.32
CCNE1-202ENST00000357943 RENP00797 406 aa13.08□□□□□ -0.32
CCNE1-202ENST00000357943 IFNGP01579 166 aa13.08□□□□□ -0.32
CCNE1-202ENST00000357943 ZNF3P17036 446 aa13.08□□□□□ -0.32
CCNE1-202ENST00000357943 COX5AP20674 150 aa13.08□□□□□ -0.32
CCNE1-202ENST00000357943 MPGP29372 298 aa13.08□□□□□ -0.32
CCNE1-202ENST00000357943 ZNF133P52736 654 aaPredicted RBP13.08□□□□□ -0.32
CCNE1-202ENST00000357943 TFF3Q07654 80 aa13.08□□□□□ -0.32
CCNE1-202ENST00000357943 ITGADQ13349 1161 aa13.08□□□□□ -0.32
CCNE1-202ENST00000357943 TSC22D1Q15714 1073 aa13.08□□□□□ -0.32
CCNE1-202ENST00000357943 CLEC18BQ6UXF7 455 aa13.08□□□□□ -0.32
CCNE1-202ENST00000357943 CXorf67Q86X51 503 aaPredicted RBP13.08□□□□□ -0.32
CCNE1-202ENST00000357943 OR6V1Q8N148 313 aa13.08□□□□□ -0.32
CCNE1-202ENST00000357943 CLEC18CQ8NCF0 446 aa13.08□□□□□ -0.32
CCNE1-202ENST00000357943 SLC38A2Q96QD8 506 aa13.08□□□□□ -0.32
CCNE1-202ENST00000357943 SNX18Q96RF0 628 aa13.08□□□□□ -0.32
CCNE1-202ENST00000357943 HCAR1Q9BXC0 346 aa13.08□□□□□ -0.32
CCNE1-202ENST00000357943 RERGLQ9H628 205 aa13.08□□□□□ -0.32
CCNE1-202ENST00000357943 SRA1Q9HD15 236 aaKnown RBP13.08□□□□□ -0.32
CCNE1-202ENST00000357943 KCNJ16Q9NPI9 418 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms