RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 FBXL4Q9UKA2 621 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 NSG1A0A0A6YYJ2 146 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 TCRBV5S2A0A599 114 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 DFFBO76075 338 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 CLDN1O95832 211 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 NFYBP25208 207 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 HSD17B7P56937 341 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 FLI1Q01543 452 aaPredicted RBP13.67□□□□□ -0.22
CHD4-201ENST00000357008 PDZK1IP1Q13113 114 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 AARDQ4LEZ3 155 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 PAN3Q58A45 887 aaKnown RBP13.67□□□□□ -0.22
CHD4-201ENST00000357008 AAED1Q7RTV5 226 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 UBL7Q96S82 380 aaPredicted RBP13.67□□□□□ -0.22
CHD4-201ENST00000357008 NECAP2Q9NVZ3 263 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 ZNF629Q9UEG4 869 aaPredicted RBP13.67□□□□□ -0.22
CHD4-201ENST00000357008 CYB5BO43169 146 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 HLA-DOBP13765 273 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 NKAIN4Q8IVV8 208 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 TEX19Q8NA77 164 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 TXN2Q99757 166 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 TMEM184BQ9Y519 407 aaPredicted RBP13.67□□□□□ -0.22
CHD4-201ENST00000357008 CLN5O75503 358 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 MT-ND4LP03901 98 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 ADRB1P08588 477 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 TRHRP34981 398 aaPredicted RBP13.67□□□□□ -0.22
CHD4-201ENST00000357008 SNCAP37840 140 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 CCSMST1Q4G0I0 132 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 PXDC1Q5TGL8 231 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 GLIPR1L1Q6UWM5 242 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 PPP1R3BQ86XI6 285 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 OR1S2Q8NGQ3 325 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 MITD1Q8WV92 249 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 HSD17B8Q92506 261 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 ZNF845Q96IR2 970 aaPredicted RBP13.67□□□□□ -0.22
CHD4-201ENST00000357008 CCNL2Q96S94 520 aaPredicted RBP13.67□□□□□ -0.22
CHD4-201ENST00000357008 ULBP3Q9BZM4 244 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 POU3F3P20264 500 aaPredicted RBP13.67□□□□□ -0.22
CHD4-201ENST00000357008 AADACP22760 399 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 EEF1A2Q05639 463 aaKnown RBP13.67□□□□□ -0.22
CHD4-201ENST00000357008 ZNF750Q32MQ0 723 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 ST8SIA4Q92187 359 aa13.67□□□□□ -0.22
CHD4-201ENST00000357008 DCLRE1CQ96SD1 692 aaKnown RBP13.67□□□□□ -0.22
CHD4-201ENST00000357008 BOKQ9UMX3 212 aaPredicted RBP13.67□□□□□ -0.22
CHD4-201ENST00000357008 A8MVM7 634 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 BHLHE40O14503 412 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 CD38P28907 300 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 BCL6P41182 706 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 SLC19A1P41440 591 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 KIAA0141Q14154 515 aaPredicted RBP13.66□□□□□ -0.22
CHD4-201ENST00000357008 DHRS4L2Q6PKH6 230 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 OLIG3Q7RTU3 272 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 TMPRSS7Q7RTY8 843 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 CLEC1AQ8NC01 280 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 Q96M85 177 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 DUSP23Q9BVJ7 150 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 ADAM19Q9H013 955 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 NKX2-4Q9H2Z4 354 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 MT-ATP6P00846 226 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 CA3P07451 260 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 MAP2K6P52564 334 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 ANGPTL5Q86XS5 388 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 SLC25A37Q9NYZ2 338 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 DOK2O60496 412 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 CTNSO60931 367 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 RIMKLAQ8IXN7 391 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 TMEM217Q8N7C4 229 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 PFN4Q8NHR9 129 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 OR1E3Q8WZA6 343 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 YIPF6Q96EC8 236 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 UQCC2Q9BRT2 126 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 SLC25A32Q9H2D1 315 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 MRPL19P49406 292 aaKnown RBP13.66□□□□□ -0.22
CHD4-201ENST00000357008 DEFB103AP81534 67 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 ADAM5Q6NVV9 412 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 OR4N2Q8NGD1 307 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 C10orf90Q96M02 699 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 OCEL1Q9H607 264 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 DUSP22Q9NRW4 184 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 IMPA2O14732 288 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 TAAR5O14804 337 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 GJA4P35212 333 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 PSMB3P49720 205 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 DGCR2P98153 550 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 MANEAQ5SRI9 462 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 BAGE3Q86Y29 109 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 BAGE2Q86Y30 109 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 FAM174AQ8TBP5 190 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 NUDT8Q8WV74 236 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 MAP3K3Q99759 626 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 HDAC8Q9BY41 377 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 FKRPQ9H9S5 495 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 NIT2Q9NQR4 276 aa13.66□□□□□ -0.22
CHD4-201ENST00000357008 A0A1B0GTW7 788 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 F11P03951 625 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 ACSM5Q6NUN0 579 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 LILRA3Q8N6C8 439 aaPredicted RBP13.65□□□□□ -0.22
CHD4-201ENST00000357008 AKIP1Q9NQ31 210 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 EXO1Q9UQ84 846 aaKnown RBP13.65□□□□□ -0.22
CHD4-201ENST00000357008 MMACHCQ9Y4U1 282 aa13.65□□□□□ -0.22
CHD4-201ENST00000357008 HPNP05981 417 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms