RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 WNT11O96014 354 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 ITGA5P08648 1049 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 TMIGD3P0DMS9 266 aaPredicted RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 GABRB1P18505 474 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 FKBP2P26885 142 aaKnown RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 CCKARP32238 428 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 ACVR1BP36896 505 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 RPL27P61353 136 aaKnown RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 COX10Q12887 443 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 POU4F3Q15319 338 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 GTF2IRD2BQ6EKJ0 949 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 TFAP2EQ6VUC0 442 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 GTF2IRD2Q86UP8 949 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 MYPOPQ86VE0 399 aaPredicted RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 PARP8Q8N3A8 854 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 ARIH2OSQ8N7S6 290 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 ITLN2Q8WWU7 325 aaPredicted RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 NSMAFQ92636 917 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 TFAP2CQ92754 450 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 PLEKHA8Q96JA3 519 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 GPX7Q96SL4 187 aaPredicted RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 RBM4BQ9BQ04 359 aaKnown RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 GABARAPL3Q9BY60 117 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 HINT3Q9NQE9 182 aaKnown RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 PLSCR4Q9NRQ2 329 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 UBAP1Q9NZ09 502 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 ZNF224Q9NZL3 707 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 NOSIPQ9Y314 301 aaKnown RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 ZNF175Q9Y473 711 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 A0A096LPE4 126 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 LOC100130705A0A1B0GUX0 176 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 A0A1W2PPZ6 126 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 WIPF3A6NGB9 483 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 ZNF726A6NNF4 738 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 A8MXE2 369 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 EEF1E1-BLOC1S5C9J1V9 151 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 MAGEB4O15481 346 aaPredicted RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 EEF1E1O43324 174 aaKnown RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 TLX2O43763 284 aaPredicted RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 WBP4O75554 376 aaKnown RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 LYZL6O75951 148 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 BCL10O95999 233 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 IL2RAP01589 272 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 GABRA1P14867 456 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 IGHV1-2P23083 117 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 COL8A1P27658 744 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 PYCR1P32322 319 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 FAPQ12884 760 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 CASP12Q6UXS9 341 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 IZUMO2Q6UXV1 221 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 DPY19L2P2Q6ZN68 376 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 AAED1Q7RTV5 226 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 CPOQ8IVL8 374 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 UEVLDQ8IX04 471 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 ZNF100Q8IYN0 542 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 ENTHD1Q8IYW4 607 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 GABRG1Q8N1C3 465 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 FAM26EQ8N5C1 309 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 RFLNBQ8N5W9 214 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 TCEANCQ8N8B7 351 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 ZNF511Q8NB15 262 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 SLC37A3Q8NCC5 494 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 POP5Q969H6 163 aaKnown RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 MCHR2Q969V1 340 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 SLC25A44Q96H78 314 aaPredicted RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 GMPPAQ96IJ6 420 aaPredicted RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 HRASLS5Q96KN8 279 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 NAA11Q9BSU3 229 aaPredicted RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 C9orf16Q9BUW7 83 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 POLDIP3Q9BY77 421 aaKnown RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 NOX3Q9HBY0 568 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 RPRD1BQ9NQG5 326 aaKnown RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 JKAMPQ9P055 326 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 RASD1Q9Y272 281 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 UGT2A1Q9Y4X1 527 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 PRSS37A4D1T9 235 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 ZNF724A8MTY0 619 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 PRR32B1ATL7 298 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 ARPC3O15145 178 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 DNPH1O43598 174 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 MRPL33O75394 65 aaKnown RBP3.54□□□□□ -1.84
LIG4-201ENST00000356922 AGFG2O95081 481 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 TXNDC12O95881 172 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 TFP02787 698 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 QDPRP09417 244 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 ACADSP16219 412 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 SDHAP31040 664 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 CAPZA2P47755 286 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 PRPS1P60891 318 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 ISL1P61371 349 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 TUBA1BP68363 451 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 TUBA4AP68366 448 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 ITGADQ13349 1161 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 PGGHGQ32M88 737 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 HIKESHIQ53FT3 197 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 TMEM201Q5SNT2 666 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 LINC01590Q5TEZ4 76 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 C12orf73Q69YU5 71 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 PLBD1Q6P4A8 553 aa3.54□□□□□ -1.84
LIG4-201ENST00000356922 C5orf46Q6UWT4 87 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms