RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 EXOSC3Q9NQT5 275 aaKnown RBP10.65□□□□□ -0.7
SPTBN1-202ENST00000356805 HCFC1R1Q9NWW0 138 aa10.65□□□□□ -0.7
SPTBN1-202ENST00000356805 DCAF16Q9NXF7 216 aa10.65□□□□□ -0.7
SPTBN1-202ENST00000356805 MAP1BP46821 2468 aaKnown RBP10.65□□□□□ -0.7
SPTBN1-202ENST00000356805 OR1D4P47884 311 aa10.65□□□□□ -0.7
SPTBN1-202ENST00000356805 LINC00696Q6ZRV3 163 aa10.65□□□□□ -0.7
SPTBN1-202ENST00000356805 ZDHHC5Q9C0B5 715 aa10.65□□□□□ -0.7
SPTBN1-202ENST00000356805 NUMBLQ9Y6R0 609 aa10.65□□□□□ -0.7
SPTBN1-202ENST00000356805 MAT1AQ00266 395 aaKnown RBP10.65□□□□□ -0.7
SPTBN1-202ENST00000356805 TMEM31Q5JXX7 168 aa10.65□□□□□ -0.7
SPTBN1-202ENST00000356805 TREX1Q9NSU2 369 aa10.65□□□□□ -0.7
SPTBN1-202ENST00000356805 AKAP12Q02952 1782 aa10.65□□□□□ -0.7
SPTBN1-202ENST00000356805 RIMBP3CA6NJZ7 1639 aa10.65□□□□□ -0.7
SPTBN1-202ENST00000356805 RIMBP3BA6NNM3 1639 aa10.65□□□□□ -0.7
SPTBN1-202ENST00000356805 RIMBP3Q9UFD9 1639 aa10.65□□□□□ -0.7
SPTBN1-202ENST00000356805 G3V3Y1 287 aa10.65□□□□□ -0.7
SPTBN1-202ENST00000356805 YIF1AO95070 293 aa10.65□□□□□ -0.7
SPTBN1-202ENST00000356805 MGMTP16455 207 aa10.65□□□□□ -0.7
SPTBN1-202ENST00000356805 Q499Y3 187 aa10.65□□□□□ -0.7
SPTBN1-202ENST00000356805 SSX7Q7RTT5 188 aa10.65□□□□□ -0.7
SPTBN1-202ENST00000356805 ZNF296Q8WUU4 475 aaPredicted RBP10.65□□□□□ -0.7
SPTBN1-202ENST00000356805 BLACEA4D250 179 aa10.65□□□□□ -0.71
SPTBN1-202ENST00000356805 APEX1P27695 318 aaKnown RBP10.65□□□□□ -0.71
SPTBN1-202ENST00000356805 PM20D1Q6GTS8 502 aa10.65□□□□□ -0.71
SPTBN1-202ENST00000356805 OPN5Q6U736 354 aa10.65□□□□□ -0.71
SPTBN1-202ENST00000356805 OR5M8Q8NGP6 311 aa10.65□□□□□ -0.71
SPTBN1-202ENST00000356805 ARL2-SNX15V9GYD0 113 aa10.65□□□□□ -0.71
SPTBN1-202ENST00000356805 ZNF142P52746 1687 aaPredicted RBP10.65□□□□□ -0.71
SPTBN1-202ENST00000356805 CD63P08962 238 aa10.65□□□□□ -0.71
SPTBN1-202ENST00000356805 NDUFB7P17568 137 aa10.65□□□□□ -0.71
SPTBN1-202ENST00000356805 PSMB3P49720 205 aa10.65□□□□□ -0.71
SPTBN1-202ENST00000356805 PHLDA2Q53GA4 152 aa10.65□□□□□ -0.71
SPTBN1-202ENST00000356805 CLEC14AQ86T13 490 aa10.65□□□□□ -0.71
SPTBN1-202ENST00000356805 OR10X1Q8NGY0 326 aa10.65□□□□□ -0.71
SPTBN1-202ENST00000356805 CD200R1Q8TD46 325 aa10.65□□□□□ -0.71
SPTBN1-202ENST00000356805 OR52D1Q9H346 318 aa10.65□□□□□ -0.71
SPTBN1-202ENST00000356805 ZNF732B4DXR9 585 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 H7C1C5 153 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 HOXA11P31270 313 aaPredicted RBP10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 LCN6P62502 163 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 ZNF687Q8N1G0 1237 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 KCNJ15Q99712 375 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 AKIP1Q9NQ31 210 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 J3KTA2 159 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 SPP1P10451 314 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 CEBPBP17676 345 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 HTR1FP30939 366 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 SSR4P51571 173 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 NTHL1P78549 312 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 SEC22AQ96IW7 307 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 DUSP21Q9H596 190 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 TBPP20226 339 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 CLDN20P56880 219 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 ZNF280AP59817 542 aaPredicted RBP10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 OR1J1Q8NGS3 322 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 FIBINQ8TAL6 211 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 FYTTD1Q96QD9 318 aaKnown RBP10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 C20orf24Q9BUV8 137 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 POFUT1Q9H488 388 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 PLK3Q9H4B4 646 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 KIAA1456Q9P272 454 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 TMX2-CTNND1H3BSU7 103 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 F2P00734 622 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 PVRP15151 417 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 CARD18P57730 90 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 ADAM5Q6NVV9 412 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 STEAP1BQ6NZ63 245 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 MOB1BQ7L9L4 216 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 RABEPKQ7Z6M1 372 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 EMG1Q92979 244 aaKnown RBP10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 CPPED1Q9BRF8 314 aaPredicted RBP10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 LINC00597Q9H2U6 94 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 ANKRD10Q9NXR5 420 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 A0A1B0GUH1 482 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 RRP8O43159 456 aaKnown RBP10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 RAB5AP20339 215 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 CSN1S1P47710 185 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 PITX1P78337 314 aaPredicted RBP10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 RPE65Q16518 533 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 GDPD3Q7L5L3 318 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 KHSRPQ92945 711 aaKnown RBP eCLIP10.64□□□□□ -0.715e-7■■□□□ 12.1
SPTBN1-202ENST00000356805 GABARAPL1Q9H0R8 117 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 RNF186Q9NXI6 227 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 ZNF586Q9NXT0 402 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 TPOP07202 933 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 HBA1P69905 142 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 DYNC2LI1Q8TCX1 351 aa10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 FAM103A1Q9BTL3 118 aaKnown RBP10.64□□□□□ -0.71
SPTBN1-202ENST00000356805 SCRG1O75711 98 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 SNAI1O95863 264 aaPredicted RBP10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 DAPP51397 102 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 ELLP55199 621 aaPredicted RBP10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 ISL1P61371 349 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 MEP1BQ16820 701 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 GLYR1Q49A26 553 aaPredicted RBP10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 PODNL1Q6PEZ8 512 aa10.63□□□□□ -0.71
SPTBN1-202ENST00000356805 SLC39A5Q6ZMH5 540 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms