RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 VAMP5O95183 116 aa16.16■□□□□ 0.18
SMARCD3-202ENST00000356800 SBK2P0C263 348 aa16.16■□□□□ 0.18
SMARCD3-202ENST00000356800 FAM87AP0C7U9 286 aa16.16■□□□□ 0.18
SMARCD3-202ENST00000356800 PDSS1Q5T2R2 415 aa16.16■□□□□ 0.18
SMARCD3-202ENST00000356800 FAM205BPQ63HN1 556 aa16.16■□□□□ 0.18
SMARCD3-202ENST00000356800 CREB3L2Q70SY1 520 aa16.16■□□□□ 0.18
SMARCD3-202ENST00000356800 ALDH16A1Q8IZ83 802 aa16.16■□□□□ 0.18
SMARCD3-202ENST00000356800 ACBD7Q8N6N7 88 aa16.16■□□□□ 0.18
SMARCD3-202ENST00000356800 POMGNT2Q8NAT1 580 aa16.16■□□□□ 0.18
SMARCD3-202ENST00000356800 OR9K2Q8NGE7 335 aa16.16■□□□□ 0.18
SMARCD3-202ENST00000356800 CPNE4Q96A23 557 aaPredicted RBP16.16■□□□□ 0.18
SMARCD3-202ENST00000356800 ZMYND19Q96E35 227 aaPredicted RBP16.16■□□□□ 0.18
SMARCD3-202ENST00000356800 MGLLQ99685 303 aa16.16■□□□□ 0.18
SMARCD3-202ENST00000356800 BCL7BQ9BQE9 202 aa16.16■□□□□ 0.18
SMARCD3-202ENST00000356800 NUAK2Q9H093 628 aa16.16■□□□□ 0.18
SMARCD3-202ENST00000356800 SRA1Q9HD15 236 aaKnown RBP16.16■□□□□ 0.18
SMARCD3-202ENST00000356800 TIGARQ9NQ88 270 aa16.16■□□□□ 0.18
SMARCD3-202ENST00000356800 LUZP4Q9P127 313 aa16.16■□□□□ 0.18
SMARCD3-202ENST00000356800 PIEZO2Q9H5I5 2752 aa16.15■□□□□ 0.18
SMARCD3-202ENST00000356800 A0A1B0GVC2 190 aa16.15■□□□□ 0.18
SMARCD3-202ENST00000356800 SLC35F4A4IF30 521 aa16.15■□□□□ 0.18
SMARCD3-202ENST00000356800 TRIM64BA6NI03 449 aa16.15■□□□□ 0.18
SMARCD3-202ENST00000356800 ZNF716A6NP11 495 aa16.15■□□□□ 0.18
SMARCD3-202ENST00000356800 CPN1P15169 458 aa16.15■□□□□ 0.18
SMARCD3-202ENST00000356800 LIPAP38571 399 aa16.15■□□□□ 0.18
SMARCD3-202ENST00000356800 ARMCX4Q5H9R4 360 aa16.15■□□□□ 0.18
SMARCD3-202ENST00000356800 EEF1A1P5Q5VTE0 462 aa16.15■□□□□ 0.18
SMARCD3-202ENST00000356800 LYPD4Q6UWN0 246 aa16.15■□□□□ 0.18
SMARCD3-202ENST00000356800 PLXDC2Q6UX71 529 aa16.15■□□□□ 0.18
SMARCD3-202ENST00000356800 ZIC4Q8N9L1 334 aa16.15■□□□□ 0.18
SMARCD3-202ENST00000356800 SYT14Q8NB59 555 aa16.15■□□□□ 0.18
SMARCD3-202ENST00000356800 C12orf43Q96C57 262 aaKnown RBP16.15■□□□□ 0.18
SMARCD3-202ENST00000356800 ZNF385AQ96PM9 386 aaKnown RBP16.15■□□□□ 0.18
SMARCD3-202ENST00000356800 MRPL13Q9BYD1 178 aaKnown RBP16.15■□□□□ 0.18
SMARCD3-202ENST00000356800 NAA50Q9GZZ1 169 aaKnown RBP16.15■□□□□ 0.18
SMARCD3-202ENST00000356800 ZNF71Q9NQZ8 489 aaPredicted RBP16.15■□□□□ 0.18
SMARCD3-202ENST00000356800 PLSCR2Q9NRY7 297 aa16.15■□□□□ 0.18
SMARCD3-202ENST00000356800 ERVK13-1Q9NX77 482 aa16.15■□□□□ 0.18
SMARCD3-202ENST00000356800 ENPP5Q9UJA9 477 aa16.15■□□□□ 0.18
SMARCD3-202ENST00000356800 H3BMQ9 156 aa16.14■□□□□ 0.18
SMARCD3-202ENST00000356800 NOL3O60936 208 aaKnown RBP16.14■□□□□ 0.18
SMARCD3-202ENST00000356800 GLCEO94923 617 aa16.14■□□□□ 0.18
SMARCD3-202ENST00000356800 SCG5P05408 212 aa16.14■□□□□ 0.18
SMARCD3-202ENST00000356800 TGFBR2P37173 567 aa16.14■□□□□ 0.18
SMARCD3-202ENST00000356800 WNT4P56705 351 aa16.14■□□□□ 0.18
SMARCD3-202ENST00000356800 CLDN17P56750 224 aa16.14■□□□□ 0.18
SMARCD3-202ENST00000356800 SLC16A12Q6ZSM3 486 aa16.14■□□□□ 0.18
SMARCD3-202ENST00000356800 ZNF485Q8NCK3 441 aa16.14■□□□□ 0.18
SMARCD3-202ENST00000356800 OR2T4Q8NH00 348 aa16.14■□□□□ 0.18
SMARCD3-202ENST00000356800 OR6X1Q8NH79 312 aa16.14■□□□□ 0.18
SMARCD3-202ENST00000356800 ALG12Q9BV10 488 aa16.14■□□□□ 0.18
SMARCD3-202ENST00000356800 SF3B5Q9BWJ5 86 aaKnown RBP16.14■□□□□ 0.18
SMARCD3-202ENST00000356800 DSPP15924 2871 aaKnown RBP16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 IGLV1-36A0A0B4J1U3 117 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 C12orf71A8MTZ7 269 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 ZNHIT1O43257 154 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 CYTIPO60759 359 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 GABARAPO95166 117 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 MRPL3P09001 348 aaKnown RBP16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 HSMCR30P0CW71 290 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 PGA4P0DJD7 388 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 PGA3P0DJD8 388 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 CTLA4P16410 223 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 CD36P16671 472 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 RGS6P49758 472 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 ACTC1P68032 377 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 ACTA1P68133 377 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 FMODQ06828 376 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 CAMK2DQ13557 499 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 DOC2BQ14184 412 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 ETFDHQ16134 617 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 INAQ16352 499 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 FCRLAQ7L513 359 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 LHFPL3Q86UP9 236 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 ZBTB46Q86UZ6 589 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 P2RY8Q86VZ1 359 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 OR6K6Q8NGW6 343 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 OR52N1Q8NH53 320 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 SMAP2Q8WU79 429 aaPredicted RBP16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 NMD3Q96D46 503 aaKnown RBP16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 ISYNA1Q9NPH2 558 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 ING1Q9UK53 422 aaPredicted RBP16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 B9D1Q9UPM9 204 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 FKBP7Q9Y680 259 aa16.14■□□□□ 0.17
SMARCD3-202ENST00000356800 IGKV1D-43A0A0B4J1Z2 117 aa16.13■□□□□ 0.17
SMARCD3-202ENST00000356800 NPIPA2E9PIF3 369 aa16.13■□□□□ 0.17
SMARCD3-202ENST00000356800 NPIPA3F8WFD2 350 aa16.13■□□□□ 0.17
SMARCD3-202ENST00000356800 AQP7O14520 342 aa16.13■□□□□ 0.17
SMARCD3-202ENST00000356800 SLC16A7O60669 478 aa16.13■□□□□ 0.17
SMARCD3-202ENST00000356800 RPS3AP61247 264 aaKnown RBP16.13■□□□□ 0.17
SMARCD3-202ENST00000356800 MLLT11Q13015 90 aaPredicted RBP16.13■□□□□ 0.17
SMARCD3-202ENST00000356800 C19orf48Q6RUI8 117 aa16.13■□□□□ 0.17
SMARCD3-202ENST00000356800 KLHL36Q8N4N3 616 aa16.13■□□□□ 0.17
SMARCD3-202ENST00000356800 ZNF511Q8NB15 262 aa16.13■□□□□ 0.17
SMARCD3-202ENST00000356800 ABHD3Q8WU67 409 aa16.13■□□□□ 0.17
SMARCD3-202ENST00000356800 SLC25A44Q96H78 314 aaPredicted RBP16.13■□□□□ 0.17
SMARCD3-202ENST00000356800 OPALINQ96PE5 141 aa16.13■□□□□ 0.17
SMARCD3-202ENST00000356800 CNN2Q99439 309 aaKnown RBP16.13■□□□□ 0.17
SMARCD3-202ENST00000356800 RERGLQ9H628 205 aa16.13■□□□□ 0.17
SMARCD3-202ENST00000356800 CAB39Q9Y376 341 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms